| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3766 |
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| Symbol | |
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| ID | 3966821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4766007 |
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| End bp | 4767254 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922863 |
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| Product | cation efflux system protein |
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| Protein accession | YP_529233 |
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| Protein GI | 90023406 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTAA TACGCTATTT ATTGGTGTTT GCCGCCACCT TGTGCGCGGT AACTTTTGGC
ACCGCACACG CTCAAACGCT AACCTTGCCT CAGGCAATAG AAAAAACGCT TAGCCACAAC
CCGCAGCTGC GCGGCTTTGA ATTTAAACAT AAGGCGCTAA CCGCGCAGCG TAAGCAAGCA
CAACTAAAAC CACAATTTAC TTTGGCGCTA GAAGCCGAGA ATTTTGCCGG CAGCGGCGAA
ATTGCCGGTA CGGATTCGGC AGAGATTACA TTGGCGCTGT CATCGGCAAT TGAACTTGGC
GACAAGCAAA ACGCCCGCAT TACCGTTGTC GATGCGCAAC AACAATTAGC CTTAGCGCAA
CAACAAATTG AAACCCTAGA CGTACTTGGC AATCTTTCGC GCGATTTTAT AAATGCACTG
GCACTTCAAG AACAAGTAAG CCTTGCAAAC TATTCTGTAC AACTCGCACA AACAACTCTC
ACTAGTGTAA CCAAGCGTGC AGAATTGGGC GCTGCACCAG AAGCCGATGT ACTGCGTGCA
AAAGCGGCGC TTAGCCAAAC TAAGCTGCAA GCGCAAACAC TGAAAACCGA ATTAACAATA
CGCTTTACTC AACTCGCTAA AAACTGGGGC GAACCTGCAG CTAGCTTTAA CAGAGTACAA
GGTGAACTCT ATACCTTTGC ACCCGCGCAA ACCTGGCAAA ACTTGCTTGC TAGTATTGAG
CAAGGCCCCG CAATTGCGCA GCTAACCAGC GAGCAGCGTA TTGCCAAGGC CCAGTATCAA
TTAATAAGTA GCCAAGCGAG TAGTGACATC GAATGGCAGC TAGGCGTTCG GTCTTTTGCA
TCAACCGGCG ACACGGGTTT AGTCGCCGCG GTGAGCATGC CGCTTGGCAG TAGCAAGCGA
AATCGTCATT CAATGAATGC CCAGCAAGCC AAACAAGATG AGCTTGTCTA TCAACAACAA
CATCAAAAAC TGCAACTGCA GGAAGTGTTA TTTAAAGCCT ACCACCTGCG CAACAACGCA
ATTAACGCTG CACATACACT ACAACAAAAC ATACTGCCCA ACTTGCAACA GGCGCTGGCG
CTTACTCAGC AAGCCTACGA GAGTGGACGC TACAGTTACC GCGATTGGTT AGCCGCACAG
CAGGATTTAC TTGAAGCAAA TCACCAACTC ATTCAAACCG CCGCAGATGC ACACAATCAA
CAAACAATGA TTGAACAGCT AACTGGGCAA GCGCTGCCAA AGCACTAA
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| Protein sequence | MHLIRYLLVF AATLCAVTFG TAHAQTLTLP QAIEKTLSHN PQLRGFEFKH KALTAQRKQA
QLKPQFTLAL EAENFAGSGE IAGTDSAEIT LALSSAIELG DKQNARITVV DAQQQLALAQ
QQIETLDVLG NLSRDFINAL ALQEQVSLAN YSVQLAQTTL TSVTKRAELG AAPEADVLRA
KAALSQTKLQ AQTLKTELTI RFTQLAKNWG EPAASFNRVQ GELYTFAPAQ TWQNLLASIE
QGPAIAQLTS EQRIAKAQYQ LISSQASSDI EWQLGVRSFA STGDTGLVAA VSMPLGSSKR
NRHSMNAQQA KQDELVYQQQ HQKLQLQEVL FKAYHLRNNA INAAHTLQQN ILPNLQQALA
LTQQAYESGR YSYRDWLAAQ QDLLEANHQL IQTAADAHNQ QTMIEQLTGQ ALPKH
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