| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3750 |
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| Symbol | |
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| ID | 3966785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4748931 |
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| End bp | 4749839 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922847 |
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| Product | outer membrane protein (porin) |
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| Protein accession | YP_529217 |
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| Protein GI | 90023390 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.817752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA AATTGTTGCC ATTGGCTGTT GCCGCTTTAA TTGCTACACC AGCCTTCGCA
GAGCCAACTT TGTACGGTAA AGCGAATGTT GCTTACCAGT TCGCAGATGA TGGTTCAGAC
AGTGTTACAG AATTAGTTAG TCACGCTTCT CGCATTGGGG TAAAAGGCTC AGAAAAGTTG
GAAGGTGGCA ACCTGGAAGT TATTTACCAA GCTGAATTCC AAGTGGATTT TGCCGATGGT
GATGAAGGCG ATAGCCCATT TAGTCAGCGC AACATCTTTG TTGGTTTGAA AGGTGACTTC
GGTACCGTAA AAGCGGGTAA GTTCGACACC CCTTTAAAAG TATCGCAAAA CAAAATCGAC
TTATTTAACG ATTTGGCTGG TGATATCAAA CACATGGTTA CCGTAAACGA CAATCGCCCA
GGCAATGTAG TGCAATACTC TACGCCAACC GCGAGCGGCT TTAGCGGTAG CTTTGCCATT
ATCAACAGCG AAGATGCAGA TGTAGATAAC GGTCTTTCTG GCTCTGTAAG CTACACCCAA
GATGCTTTGT ACGTTTCTTT GGCACGCGAT GAAAACGTTG AAGCAGAAGA CACAAATGCG
ACTCGTTTAG TTGGTCAATA CAGCATGGGT GATATTCAAT TGGGCGCACT TTACGAAGCT
TATGAAGCTG CGGGTGCAGA TTCAGAAAAT GGCTGGTTAG TTTCGGCTAA ATACAAATTA
GACGCGTGGG CGCTTAAGCT GCAAGCGGGC CAAAGTGATA TTAACGAAGC GGGCGGTCAG
ACTGTAAGCG TTGGTGCAGA TCGCAAGCTA TCTAAAGCTG CAAAATTGTT TTTCTACTAC
ACTGCACAAG AATCAGATGC GGGTACAGAT GATAACTTCT TGGGCGCAGG CGTAGAAGTA
AAATTCTAA
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| Protein sequence | MKIKLLPLAV AALIATPAFA EPTLYGKANV AYQFADDGSD SVTELVSHAS RIGVKGSEKL
EGGNLEVIYQ AEFQVDFADG DEGDSPFSQR NIFVGLKGDF GTVKAGKFDT PLKVSQNKID
LFNDLAGDIK HMVTVNDNRP GNVVQYSTPT ASGFSGSFAI INSEDADVDN GLSGSVSYTQ
DALYVSLARD ENVEAEDTNA TRLVGQYSMG DIQLGALYEA YEAAGADSEN GWLVSAKYKL
DAWALKLQAG QSDINEAGGQ TVSVGADRKL SKAAKLFFYY TAQESDAGTD DNFLGAGVEV
KF
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