| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3710 |
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| Symbol | |
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| ID | 3966726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4696567 |
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| End bp | 4697997 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922807 |
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| Product | arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_529177 |
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| Protein GI | 90023350 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000857688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.462081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTAT CTATAAAGAA AGCGCTATGC GCTATGGCTG CGTCCACCTT TATTTTGCTG
CAGGCTTCAA ACGCCCTTGC TATGGCAAAA GGTGCAGATG TGAGTTGGAT TTCTGAAATG
GAAGCAGAGG GCTACACGTT TTATAACGAT GCGGGCCAGC AGCAAGATGT GCTGCAAATT
CTAAAAGATC ACGGTATGGA TTCCATCCGT CTGCGCGTGT GGGTAAACCC CGCCGGTGGA
TGGTATAGCA GCATTAATGA CGTAATAGAA AAAGCTCAGC GCGCCAAAGC TGCGGGCATG
CGTATTATGA TCGATTTTCA CTACAGCGAC TCTTGGGCTG ACCCAGGCAA GCAATACAAG
CCCGCCGCGT GGACCAACTA TACCTTAGAC GGTTTAATGT CTGCGGTGTG GTGGCACACC
TACGATTCCC TCGTGGCCCT AAAGAATGCG GGTATTACCC CTGAATGGGT GCAAGTGGGC
AACGAAACAA ACAACGGTAT GTTATGGGAA GAGGGGCGCG CATCCGCCAA TATGCAAAAC
TATGCGTGGT TGGTGAATAG TGGCTACGAT GCCGTTAAAG AAGTGTTCCC TAATACCAAG
GCAGTGGTGC ACTTGGCAAA CTGCCACGAC AACGCAAACT TCCGCTGGAT ATTTGACGGC
TTACAAGCCA ATGGTGGTAA GTGGGATGTA ATAGGTGCCT CTATTTACCC TACCAACGCA
AGCGGTTATA GCTGGAGCCA AGCCAACAGT TTGTGCGAGG CAAACTTAAA CGATATGCAA
TCGCGCTATG GGTCCGAGGT GCTAATTGCC GAGGTTGGTG CGCCGTGGGA TCACCCAGAA
GCGAAAGCAA TCGTGAGCGA TGTAATTGCT AAGGCGCAAA ACGCCGGTGC AACAGGGGTA
TTTTATTGGG AGCCGCAGGC ATCAAACTGG CAGGGCTACA CGCTAGGTGC ATGGAACCCA
AACACCATGC GCCCCACCGA AGCATTAGAC GCGTTTATTG ACGGCAGCTC GAATGTGACA
ACCGCGCGTT TGCAATCGCG CAATAGCAAC CGCTGTATAG ATGTTAATGG CCGCAGTACA
GCAGATGGTG CCGATATCAT TCAGTGGAGT TGCCACAGCA ACGCCAACCA GCAATGGACT
TTTGAAGATA TGGGCAATAA CTACGTGCGA TTGCGCGTGG GCCACAGTAA TAAGTGCTTA
GATGTACTGG GTGCAGGCAC TGCCGATGGC GATAACGTAG TGCAGTGGGC ATGCCACAAT
AACGCCAATC AGCAATGGCT AAAAGAAGAC ATGGGCGATG GCTACTTCCG CTTAAAATCT
CGCGCCAGCG GTAAATGCGT AGATGTAAAC GCAGGCGGTG CTAACAACGG TGATTCTATT
ATTCAATGGA GTTGCCACAC TGGTTGGAAC CAGCAATGGA TGGTTTATTA G
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| Protein sequence | MTLSIKKALC AMAASTFILL QASNALAMAK GADVSWISEM EAEGYTFYND AGQQQDVLQI
LKDHGMDSIR LRVWVNPAGG WYSSINDVIE KAQRAKAAGM RIMIDFHYSD SWADPGKQYK
PAAWTNYTLD GLMSAVWWHT YDSLVALKNA GITPEWVQVG NETNNGMLWE EGRASANMQN
YAWLVNSGYD AVKEVFPNTK AVVHLANCHD NANFRWIFDG LQANGGKWDV IGASIYPTNA
SGYSWSQANS LCEANLNDMQ SRYGSEVLIA EVGAPWDHPE AKAIVSDVIA KAQNAGATGV
FYWEPQASNW QGYTLGAWNP NTMRPTEALD AFIDGSSNVT TARLQSRNSN RCIDVNGRST
ADGADIIQWS CHSNANQQWT FEDMGNNYVR LRVGHSNKCL DVLGAGTADG DNVVQWACHN
NANQQWLKED MGDGYFRLKS RASGKCVDVN AGGANNGDSI IQWSCHTGWN QQWMVY
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