| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3703 |
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| Symbol | |
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| ID | 3966719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4688076 |
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| End bp | 4688774 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922800 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_529170 |
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| Protein GI | 90023343 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.230236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0884672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAAGC GTATTTTGCT AATAGAAGAT CACCAAGACA TCAACGCATT AATTGCGATG
AACTTGGAAG TATTAGATTA CCACGTCACC CGCTGCAGCG ACGGCGCGGA AGGCCTACAC
CTTGGCACCA CTCAAACCTT CGATTTAATA ATTTTAGATA TTATGCTACC CAGCATGGAT
GGCCTACAGG TTTGCCAACA TCTACGTGCC AAAAATATAT TTACACCTAT TCTTATGCTT
ACTGCTAAAA AATCCGAATC GGACCGCGTA GTAGGCTTAG AAACCGGTGC AGACGATTAT
CTTACCAAAC CTTTTAGCGT GCGCGAGCTA CAAGCCCGCG TAAAAGCCCA TTTGCGCCGC
ACCGATATGA GCCAAAAGGA AAGCACACCT CAAGCAGACG ATGCGCTGCA CTTTGGCGAG
TTGTGTATAG ATAAAACCAA ACGCAGGTTA ACCATTGGCG ACAAAGAAAT AACCCTTACC
GCAAAGGAAT TTGATTTATT GCTATATATG GCCAGCCACC CGGGCCAAGT ATTTAGCCGC
GAAAAATTAT TAGATGCCGT ATGGGGTTAT CAGCACAGCG GCTATGAGCA CACGGTTAAC
TCTCACATTA ACCGTTTGCG CACCAAACTA GAAACCGATA CATCCAACCC TAAATACGTA
TTAACAGTAT GGGGAGTAGG CTACAAGTTT TATGATTAA
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| Protein sequence | MQKRILLIED HQDINALIAM NLEVLDYHVT RCSDGAEGLH LGTTQTFDLI ILDIMLPSMD
GLQVCQHLRA KNIFTPILML TAKKSESDRV VGLETGADDY LTKPFSVREL QARVKAHLRR
TDMSQKESTP QADDALHFGE LCIDKTKRRL TIGDKEITLT AKEFDLLLYM ASHPGQVFSR
EKLLDAVWGY QHSGYEHTVN SHINRLRTKL ETDTSNPKYV LTVWGVGYKF YD
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