| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3675 |
|---|
| Symbol | |
|---|
| ID | 3966632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4657645 |
|---|
| End bp | 4658547 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637922772 |
|---|
| Product | acetylglutamate kinase |
|---|
| Protein accession | YP_529142 |
|---|
| Protein GI | 90023315 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0548] Acetylglutamate kinase |
|---|
| TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0797606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0933841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC AAGATCAAGC ACTAGAAGTA GCAAAAGTAC TCACCGAGGC GCTGCCTTAT
ATTCAACGCT TTACCGGCAA AACTATTGTT GTAAAGTTTG GTGGCAACGC TATGACCGAT
ACCGAGCTAC AGAATAGCTT TGCGCGCGAT ATTGTGTTGA TGAAGTTGGT GGGCATGAAC
CCTATTGTTG TACACGGTGG TGGGCCTCAA ATAGGCGACT TACTTAAAAA ATTAAATATC
GAATCGTCAT TTGTTGATGG TATGCGCGTA ACAGATAGCG CAACAATGGA TGTGGTCGAA
ATGGTATTGG GCGGTACAGT TAACAAACAA ATTGTTAGCC TAATTAATCG CAATGGCGGC
CAAGCAATTG GCGTAACGGG TAAAGACGGT AATTTAATTC ACGCAAAAAA ATTAACCGTT
AATCGCAAAA GCCCAGAAGT ACAAGCGTCA GAAATAATTG ATATAGGTCA TGTAGGCGAA
GTGAAAACAA TTAACCGTTC TGTCATTGAT GTTTTGGTTA ACAGTGATTT TATTCCGGTT
ATTGCACCAA TTGGTGTGGG CGACGATGGC GCCAGCTATA ATATTAATGC CGACCTAGTA
GCAGGAAAAG TTGCAGAAGT GTTACAGGCC GAAAAGCTTA TGTTGTTGAC CAATGTGGCA
GGCCTGCAAG ACAAGTCTGG TCAAGTTTTA ACAGGTTTGA CCACAGGTCG CGTAGACGAA
TTAATTGCCG ATGGCACAAT ATATGGTGGT ATGTTACCAA AAATTAGTTG TGCACTGGAT
GCCGTTAAAT GTGGTGTAAA AAGTGCACAC ATTATAGATG GCCGTGTTCC ACACGCCGTA
CTGTTGGAAA TCTTTACAGA TTCTGGTGTG GGTACGCTCA TTACTAACGA ATATTCGGCT
TAG
|
|---|
| Protein sequence | MQTQDQALEV AKVLTEALPY IQRFTGKTIV VKFGGNAMTD TELQNSFARD IVLMKLVGMN
PIVVHGGGPQ IGDLLKKLNI ESSFVDGMRV TDSATMDVVE MVLGGTVNKQ IVSLINRNGG
QAIGVTGKDG NLIHAKKLTV NRKSPEVQAS EIIDIGHVGE VKTINRSVID VLVNSDFIPV
IAPIGVGDDG ASYNINADLV AGKVAEVLQA EKLMLLTNVA GLQDKSGQVL TGLTTGRVDE
LIADGTIYGG MLPKISCALD AVKCGVKSAH IIDGRVPHAV LLEIFTDSGV GTLITNEYSA
|
|---|
| |