| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3604 |
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| Symbol | |
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| ID | 3966466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4564876 |
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| End bp | 4567197 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922701 |
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| Product | hypothetical protein |
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| Protein accession | YP_529071 |
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| Protein GI | 90023244 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0522431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00718988 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAGCC TGCCTCTTTA CCCCGCCAGC CCTAGCGGCG TACCTCAGGA ATTAACCAAA
GCCAAAGCCA GTTATAAGCG CCAAGCCATG TATGCCATGG CGGGCTTGTT GGTATTTATG
CTGTTGTATA TTGCGTTAAT GGTGAGCTTT GGTTTTATTA GTTACCAAGG CTTCTTGGCG
CTAAGTAGTG TGTTCGATCT GGTTACCCTA TTTATTAGCG TTGTTTCGCT AATGCTTGCT
GTGTTTATGG CAAAATCGCT GTTTGCTGTG CGCAAATCTG GCGACCCGCG CGGTATAGAA
GTTACTGCCG AGCAAGAGCC AAAATTATTT GAATTTTTAA ATACACTCGC CGATGAAGTG
GGCGCGCCTA AACCGCACCG TGTATTTCTT ACCCCAGAAG TAAACGCCGC AGTGTTTTAC
GATTTATCGC TGTGGAATTT ACTTTTTCCC TCTAAGAAAA ATTTAATTGT TGGCTTGGGT
TTGGTTAATG TCTTAAACCT TGGCGAATTT AAAGCTGTGC TCGCCCACGA ATTTGGGCAT
TTTGCACAGG GCTCGATGAT GGTGGGGCGC TGGGTGTATA TAGCGCAACA AATTATTGGC
CATATGGTGG CTACCCGCGA CTGGTTAGAT AAAACCGTAA GTTTTATTTC GCGCATTGAT
TTACGTATAG CCTGGGTTGG GTGGTTGTTG TCGTTGGTAA TGTGGGCCAT GCGCAGTGTA
GTGGATACCC TGTTTCGCGT GGTAATTATT GCCGAGCGCG CGCTTAGCCG CGAAATGGAA
TTTAATGCCG ATTTAGTGGC GGTAAGCGTA ACCGGTAGTG ATGCGCTGGT GAATGCACTA
CACAAATTGC AAGCTGCCGA TCACGCTTGG CAAACGGCAT TGAACATAGC CGGCCGCGAA
GCTGGCTCGG GTAAATTAGT AGACGATTTA TTTTTGGCGC AACAAGAAGC CATTAACCAA
TTGCGCAGAG TTATGGCCGA CGATACCTAT GGGGCTACAC CAGAATTACC GGCAGAAAAC
CTGCGCCCTG CGCACCGCGT GTTTGATGCC GATTCTGCGC GGCCACCGCA AATGTGGGCA
ACACACCCTG CAAACCGCGA CCGAGAAGAT AATGCCAAAA GCGTATATGT ACCCGCCGAA
ATAGATTCTC GTTCTGCGTG GTTAGTGTTT AGCGATGCGC AGGCCATAAG AAATAAAGTA
AGTGTAGATA TTTTTAACAC CGAAAAAGCC AAAGAGTGGG AAAAAACCTG CCCACAGCAA
GCTGTACAAG CGCGCTTTAG TCGCGCTTCG TATTCGCCGG AATATCGCGG TACGTATTTG
AATCGCAGTT GGGCTAGAAA TTTTGAATCG GCGGAAGAAA TTTTTTCCTT TGGTTCTGAG
AAGGCTAGCG CGAAAGAATC CTTGGCCGAT ATTTACCCGC AATCTCTGCG CGACGATTTA
GAAGCCGCGC GCAGCTTAGA TATAGAACGC TCCACCTTAC AGGCATTGGC TTCGGGTGAG
CTTAAACCTT CTGGGGGTAT TATTCGGCAC CGCGGAGAAG AGCTTAAAAA AGGGGATATT
CCCAATGCAA TTGCAGCCAT TAGCAAAGAG CGCAAAGTGG TTGCCGACAG GTTGAAATTA
CATGATGCAT GTTGCCGCCG CGCCCACCTG CAAGCCGCAA AAGAGCTGGG GCAAGATTGG
GATGTTTATT TGCAAAGCTT GGTGGCGTTA GTGCATTGCA CCGAACATTT AAGTGCAAAG
GTCGAAGACG AACTTGCGTT TATGGTAAAC ACTTGGCAAG TAATAACAGC CGACGGCCAA
ATAGGCTTTT TTGAAAAACG CCGTATGCTT AAAGCCTGTA ATGGTGTGCA GGCGGTAATG
GAGGAAGTGT CGGTTGCCTT GGCTAAAATT ACGCTGCCTG CGGCAATATT AGAAGAAATT
GGCATTCACA GCTGGAGCAA AGAATGCCCC AAGTTTGAAT TGGTGGATGT AAATAAAAAG
AACTGGGGTC AGTGGTGCCC CGCCGCTGCA GAGCAAATGG AAAATATAAA TCACGCGCTA
AGTGTGCTGA ATAATATTGC GCTCGAAACG CTTATTACTA CCGAGGCAGA ATTAAAACAG
CATATTGAGC AGGGCACCCA GCCCAGCAAG GCGCCATACC CTGGGGCTGC GCCGCGCAAT
CATCCAAAAT TAATGCCGGG TGACGAGCAT GTGCTACAGC GCAAACTCGA TTTGTGGAAT
CGCTTTCAGC TTGCGCACGG TTTAGCGCCA ACCCTTGCGC GCTTGTTGGT ATCTATGGGT
ATTGTTGGGG GTACTATATA CAGCGGTGTG ATGTTTATTT AG
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| Protein sequence | MNSLPLYPAS PSGVPQELTK AKASYKRQAM YAMAGLLVFM LLYIALMVSF GFISYQGFLA
LSSVFDLVTL FISVVSLMLA VFMAKSLFAV RKSGDPRGIE VTAEQEPKLF EFLNTLADEV
GAPKPHRVFL TPEVNAAVFY DLSLWNLLFP SKKNLIVGLG LVNVLNLGEF KAVLAHEFGH
FAQGSMMVGR WVYIAQQIIG HMVATRDWLD KTVSFISRID LRIAWVGWLL SLVMWAMRSV
VDTLFRVVII AERALSREME FNADLVAVSV TGSDALVNAL HKLQAADHAW QTALNIAGRE
AGSGKLVDDL FLAQQEAINQ LRRVMADDTY GATPELPAEN LRPAHRVFDA DSARPPQMWA
THPANRDRED NAKSVYVPAE IDSRSAWLVF SDAQAIRNKV SVDIFNTEKA KEWEKTCPQQ
AVQARFSRAS YSPEYRGTYL NRSWARNFES AEEIFSFGSE KASAKESLAD IYPQSLRDDL
EAARSLDIER STLQALASGE LKPSGGIIRH RGEELKKGDI PNAIAAISKE RKVVADRLKL
HDACCRRAHL QAAKELGQDW DVYLQSLVAL VHCTEHLSAK VEDELAFMVN TWQVITADGQ
IGFFEKRRML KACNGVQAVM EEVSVALAKI TLPAAILEEI GIHSWSKECP KFELVDVNKK
NWGQWCPAAA EQMENINHAL SVLNNIALET LITTEAELKQ HIEQGTQPSK APYPGAAPRN
HPKLMPGDEH VLQRKLDLWN RFQLAHGLAP TLARLLVSMG IVGGTIYSGV MFI
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