Gene Sde_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3593 
Symbol 
ID3966455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4552936 
End bp4553307 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content50% 
IMG OID637922690 
Producthypothetical protein 
Protein accessionYP_529060 
Protein GI90023233 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000700464 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.124416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCA AGACCTACCT AATTGTTGCC GCTAGCATGG GCATGCTGAG TGTTATGTTG 
GGGGCCTTTG CCGCTCACGG GCTTAAAGCC AAGTTATCTG AAACGCTATT GCACGCATTT
CAAACCGGTG TGCAGTATTT GTTTTTTCAC GCTTTGGCAT TGCTTGCCGT AGCGATTTTA
TTGCGCAGTA TCACCTCGGT TTGGTTGCAT GGTGCGGGCG CATTATTTAT TGCTGGCGCG
CTGCTTTTTA GTGGCAGCCT TTTTGGTTTA GCGCTTGGTG GGCCATCGTG GTTGGGGCCA
GTAACCCCGA TGGGTGGCCT GTGTTTTATT TTAGGGTGGG CAGCACTTAT TGTTGCCGCA
GTGAAGATTT AG
 
Protein sequence
MIAKTYLIVA ASMGMLSVML GAFAAHGLKA KLSETLLHAF QTGVQYLFFH ALALLAVAIL 
LRSITSVWLH GAGALFIAGA LLFSGSLFGL ALGGPSWLGP VTPMGGLCFI LGWAALIVAA
VKI