Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3589 |
Symbol | |
ID | 3966451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4549071 |
End bp | 4550075 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637922686 |
Product | putative CheA signal transduction histidine kinases |
Protein accession | YP_529056 |
Protein GI | 90023229 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000185942 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.227845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCCA GAAAAAAAGT TACCGACCCT ATTGCAGACT TAGAAAGCCA AATAGCGAAA GTTAGCGCGC AGCTAGACCA AGCTAGGGCT AAAAAAGTTG TAGCAGCCGA AAAAGCGTTA AAAGCTAGCG ACAGCGCTGC TAAAAAAGCC AAAACCAAGT TAACTGGCTT ACAAGCTAAA GCTAAAACAG CCGCAGCAAA TGCAAAGGCA AAGAAAACAG CGGCCAGTAA AGCAAGTGCC GAGAAAGCAC GTTTAGCTGT AGAAGCATTC AAACAAACCG CTGCCGCAGC TGCAGCCGAT TTAGCCGCTG CCAAGCAAGC ACTTGCCGAT GCAAAAGCAG AAAAAGCGAA AGCAGACGCT CGCGCAAAAC TTGTAGCCTC TGCCGAGAAA GCTGCCGCGC CTAAAGCCAA AAAAGCGAAG GCCAAGCCAA AAGCAAAACC CGCTGCGAAA AAAGCACCTG CGGCCAAAAA AGCCCCCGCA GCCAAAGCAG CCCCTGCTAG CGAAGCCGAG GCACCAGCTA AGCCTGCCGC TAAAAAAGCA CCCGCCAAAA AGGCCGCCCC AAAGAAAGTA GCAGCCAAGA AAGCGGCCCC TAAAAAAGTA GCAGAGAAGG CTGAAACAGC TGCCGCCCCA GCTAAACCCG CAGAGAAAAA ACCAGCAGCT AAGAAAGCAG CCCCTAAAAA GGCAGCACCA AAAGCCGCAG CAGCTGCCGA CAAACCAGCA CCAGCTAAAG CCGCACCCAA AGCGCCTGAA GCAAAAGTAG AAACACCTGC GCCAGTTGTA CCACCAAAGC CAGCCCCAGT TATTCCCGCT ACACCAGTAG CCCCGGCGGC ACCCGCGGTT GAAAAAACTG AAGTTAAAAA ACCAGAAGTG AAAGTAGAGG CTAAAACAGA AGCTAAAGCA GAACAACCAG CTAAGCCTGC TCCACAACCA GCCCCTGCTG CACCAAGCGC ACCCGAGGAA AAAATCATTC CTCAACCATC TGGCGGTTTA TTCGATTCTG AGTAA
|
Protein sequence | MAARKKVTDP IADLESQIAK VSAQLDQARA KKVVAAEKAL KASDSAAKKA KTKLTGLQAK AKTAAANAKA KKTAASKASA EKARLAVEAF KQTAAAAAAD LAAAKQALAD AKAEKAKADA RAKLVASAEK AAAPKAKKAK AKPKAKPAAK KAPAAKKAPA AKAAPASEAE APAKPAAKKA PAKKAAPKKV AAKKAAPKKV AEKAETAAAP AKPAEKKPAA KKAAPKKAAP KAAAAADKPA PAKAAPKAPE AKVETPAPVV PPKPAPVIPA TPVAPAAPAV EKTEVKKPEV KVEAKTEAKA EQPAKPAPQP APAAPSAPEE KIIPQPSGGL FDSE
|
| |