Gene Sde_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3589 
Symbol 
ID3966451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4549071 
End bp4550075 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID637922686 
Productputative CheA signal transduction histidine kinases 
Protein accessionYP_529056 
Protein GI90023229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000185942 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.227845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA GAAAAAAAGT TACCGACCCT ATTGCAGACT TAGAAAGCCA AATAGCGAAA 
GTTAGCGCGC AGCTAGACCA AGCTAGGGCT AAAAAAGTTG TAGCAGCCGA AAAAGCGTTA
AAAGCTAGCG ACAGCGCTGC TAAAAAAGCC AAAACCAAGT TAACTGGCTT ACAAGCTAAA
GCTAAAACAG CCGCAGCAAA TGCAAAGGCA AAGAAAACAG CGGCCAGTAA AGCAAGTGCC
GAGAAAGCAC GTTTAGCTGT AGAAGCATTC AAACAAACCG CTGCCGCAGC TGCAGCCGAT
TTAGCCGCTG CCAAGCAAGC ACTTGCCGAT GCAAAAGCAG AAAAAGCGAA AGCAGACGCT
CGCGCAAAAC TTGTAGCCTC TGCCGAGAAA GCTGCCGCGC CTAAAGCCAA AAAAGCGAAG
GCCAAGCCAA AAGCAAAACC CGCTGCGAAA AAAGCACCTG CGGCCAAAAA AGCCCCCGCA
GCCAAAGCAG CCCCTGCTAG CGAAGCCGAG GCACCAGCTA AGCCTGCCGC TAAAAAAGCA
CCCGCCAAAA AGGCCGCCCC AAAGAAAGTA GCAGCCAAGA AAGCGGCCCC TAAAAAAGTA
GCAGAGAAGG CTGAAACAGC TGCCGCCCCA GCTAAACCCG CAGAGAAAAA ACCAGCAGCT
AAGAAAGCAG CCCCTAAAAA GGCAGCACCA AAAGCCGCAG CAGCTGCCGA CAAACCAGCA
CCAGCTAAAG CCGCACCCAA AGCGCCTGAA GCAAAAGTAG AAACACCTGC GCCAGTTGTA
CCACCAAAGC CAGCCCCAGT TATTCCCGCT ACACCAGTAG CCCCGGCGGC ACCCGCGGTT
GAAAAAACTG AAGTTAAAAA ACCAGAAGTG AAAGTAGAGG CTAAAACAGA AGCTAAAGCA
GAACAACCAG CTAAGCCTGC TCCACAACCA GCCCCTGCTG CACCAAGCGC ACCCGAGGAA
AAAATCATTC CTCAACCATC TGGCGGTTTA TTCGATTCTG AGTAA
 
Protein sequence
MAARKKVTDP IADLESQIAK VSAQLDQARA KKVVAAEKAL KASDSAAKKA KTKLTGLQAK 
AKTAAANAKA KKTAASKASA EKARLAVEAF KQTAAAAAAD LAAAKQALAD AKAEKAKADA
RAKLVASAEK AAAPKAKKAK AKPKAKPAAK KAPAAKKAPA AKAAPASEAE APAKPAAKKA
PAKKAAPKKV AAKKAAPKKV AEKAETAAAP AKPAEKKPAA KKAAPKKAAP KAAAAADKPA
PAKAAPKAPE AKVETPAPVV PPKPAPVIPA TPVAPAAPAV EKTEVKKPEV KVEAKTEAKA
EQPAKPAPQP APAAPSAPEE KIIPQPSGGL FDSE