Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3588 |
Symbol | |
ID | 3966450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4547916 |
End bp | 4548647 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922685 |
Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
Protein accession | YP_529055 |
Protein GI | 90023228 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000000438109 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.302689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TACCATTGGT TACAGCTATG TGCGCAGTGA TCGCATTGGC TGGGTGCAAC AAAGAAGAAG CATCCGTTAA AAAAGAATTG GTATTGGAAA CCTCCGAGCA AAAAGTTAGC TATCTTATTG GCCAAAACTT AGGGTCCAAC ATGGGCCAAG ATAAGTTTGA GTTGGATATG GATGCAATGG TTGCGGGCTT AGAAGAAGGT CTTGCGGGTA AAGAAAGCCG CATTTCTGAA GAAGACGCTC GCGCCGTAAT GATGGCTTTC CAAGCCGAGC AACGCGCCAA AATGGAAGCG GCTCAGCAAG AAGAAGCGCA AAAAACTTTG GCTGAGGCAC AAGCTTTCTT AGCTGAAAAC GCCACTAAAG AAGGTGTAGT ACAAACCGAA AGCGGCTTAC AGTATAAAGA ATTGAAAGCT GGCGACGGCG CAACCCCTAC CGCATCTGAC ACGGTTGTGG TTCACTACTC TGGTACGTTA TTAGACGGTA CCGAATTTGA CAGCTCTCAC AAGCGCGGTA AGCCTGCTGA ATTTATGGTG GGTGCACTTA TTCCTGGTTG GGTTGAAGCG CTACAGTTGA TGCAAGTGGG CGACGAGTGG GAACTATATG TACCTGCCGA CTTAGCTTAC GGCCCTGGCG GCACGCCAAA CATTCCTGGC AACTCTACGT TGATCTTCAA AATGGAATTG TTAGACATCA AAGCTAAAGA GGCTCCTGCT GAAGCGAAAT AA
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Protein sequence | MKKLPLVTAM CAVIALAGCN KEEASVKKEL VLETSEQKVS YLIGQNLGSN MGQDKFELDM DAMVAGLEEG LAGKESRISE EDARAVMMAF QAEQRAKMEA AQQEEAQKTL AEAQAFLAEN ATKEGVVQTE SGLQYKELKA GDGATPTASD TVVVHYSGTL LDGTEFDSSH KRGKPAEFMV GALIPGWVEA LQLMQVGDEW ELYVPADLAY GPGGTPNIPG NSTLIFKMEL LDIKAKEAPA EAK
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