| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3509 |
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| Symbol | |
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| ID | 3966351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4462456 |
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| End bp | 4464069 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922606 |
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| Product | fibronectin, type III |
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| Protein accession | YP_528976 |
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| Protein GI | 90023149 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.736082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.990532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTA ACCGCGCAAC TGTTCAGCGA ATCAGTTCAA TCTCGCCAAT ATGGATAGTG
CCCGCTGTGG CCTTAGCGAT TGCATTGTGG TTAGCCGTGC AAGCGCGCAT GGAAAAAGGC
GCAACCATCG AAATAGAGTT TGCTAACGCG ACCGATATTA TTCCCGGCCA AACCCAAATA
CGTTTAAAAG ATGTACGAGT AGGCTTAGTA AAAGACGTGA AGCTCACGCG CGACTTGAAG
TCGGTACGGG TTATTGCCGA GTTAGATCGC GAAGTGTCGC AAAACCTCAG CAAAAATTCG
CGCTTTTGGG TAGTTACCCC ACGCATTAGT GCCACTGGAG TGTCTAACTT GGGTACATTA
ATTTCCGGTG TGTATATTGT GATGGACCCC GGTGAGCCGG GTGAATTTGA AACCAAATTT
AAAGGCCTAA AAGAACCGCC GGTTTACCAA TCTGATGAGC CTGGCATGCA GTATGTCATG
CAGGCTGAAG AGCTAGGGTC TATCGACATT GGTTCACCGC TTTACTACCG CCAAATTCGA
GTGGGCGAAG TTACATCTTA TAAGTTGGCG GAAGATAACA ACCATGTAGA TATCAACGTA
TTTATTCGCG CGCCTTACAA TAAATTGGTG CAAACCCGCA GCCGGTTTTG GAATGTGAGC
GGCTTTGGTT TATCTATGGG GGCCGACGGC ATAAAAGCGC ATATGGCTTC GCTAGCCTCG
TTAATAAGTG GCGGTATAGC GTTCGATAAT GCCGCAGGCT TCGAAAACGC AACCCTTGCC
GATGAAGGGC GACGGTTTTT TCTCTACCCA GATCGGGAGT CGGTACAAGA AGGGCGCTTT
AATATTAAAT ACTACTACCT GTTGCGTTTT AGCGATTCAG TGCGCGGGTT AACAGTGGGT
GCGCCGGTAG AATTTAGGGG AATTCATATC GGTGAAGTGG TCGATGTATC GCTAGATACT
GCAGACAATA TAGAAAAAAG CTTGCTGGTG TATATTGCTA TGGAGCCTCA GCGTTTAGAG
CCAAACACCA ACCCAACCCG CGAAGAAGTT GATGCGCGTA TGGAATCGTT AGTGGCGCAG
GGGTTGCGCG CAAAAATGAA AACCGCCAGC ATGCTAACCG GTTCGCGCTA TATCGATTTG
GTGTTTGAAA ACGATGCTAA CGACGGCCAT GTTGCATTTG TGCGTGCAGA GAATTACTCA
GAAATACCAA CCGCTAATGG CACAATTGAT GACCTAACCC GTGAAGTGGC GGGTATAGTG
GGCAAAATAA ATAACATTCC CTTTGAGCAA ATAGGCTCAG ATTTATCTGC CAGTATGTCG
AGTTTAAAAA CCATATTGGG CGATTTAGAG CGCAACCAAA CAGCCGATAA AATGGATGCG
GCTGTGGCGA ACCTTGATAA AACCTTAGAA AACGCCAAGC AGGCACTTGG TCAGTTAGAC
AGCGTACTGC AAAGTGTTGA TCATGCTATT GCCCCCGACT CTGAACTAAA ATATGAATTA
ACCGAAATGT TAAAAGCTGT GAGCGAAGCG GCGGGCTCGG TGGAATTATT TGTTAACGAG
CTCAACCGAA ACCCCAATGC GTTAATTTCT GGTGTAGATA AAGATGATGA ATAA
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| Protein sequence | MRINRATVQR ISSISPIWIV PAVALAIALW LAVQARMEKG ATIEIEFANA TDIIPGQTQI
RLKDVRVGLV KDVKLTRDLK SVRVIAELDR EVSQNLSKNS RFWVVTPRIS ATGVSNLGTL
ISGVYIVMDP GEPGEFETKF KGLKEPPVYQ SDEPGMQYVM QAEELGSIDI GSPLYYRQIR
VGEVTSYKLA EDNNHVDINV FIRAPYNKLV QTRSRFWNVS GFGLSMGADG IKAHMASLAS
LISGGIAFDN AAGFENATLA DEGRRFFLYP DRESVQEGRF NIKYYYLLRF SDSVRGLTVG
APVEFRGIHI GEVVDVSLDT ADNIEKSLLV YIAMEPQRLE PNTNPTREEV DARMESLVAQ
GLRAKMKTAS MLTGSRYIDL VFENDANDGH VAFVRAENYS EIPTANGTID DLTREVAGIV
GKINNIPFEQ IGSDLSASMS SLKTILGDLE RNQTADKMDA AVANLDKTLE NAKQALGQLD
SVLQSVDHAI APDSELKYEL TEMLKAVSEA AGSVELFVNE LNRNPNALIS GVDKDDE
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