| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3432 |
|---|
| Symbol | |
|---|
| ID | 3966236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 4369913 |
|---|
| End bp | 4370377 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637922529 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_528899 |
|---|
| Protein GI | 90023072 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3558] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000256259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTC CACCGTTACC TCCATTCAAT GAAGAGACAG CAAAGCGAAA AATCCGTTTA
GCCGAAGATG GCTGGAACAG TCGTGATCCA CACAAAGTTG CTTTGGCATA CACCGAAAAC
TGCACTTGGC GTAATCGTGC CGAGTTTATT AGTGGGCGCA AAGCAATCAT AGCAATGCTC
ACGCGAAAAT GGATTCGCGA ACTAGATTAT CGCCTAGTGA AGGAACTGTG GGCCTACACT
GAAAATCGCA TTGCCGTTCG CTTCGCTTAT GAATTTAGAG ATGACTCAAA TCAATGGCAC
CGCGCCTACG GCAACGAAAA TTGGGAATTT AATAAAGATG GGTTAATGCA ATGCCGTATA
GCTAGCATCA ATGAACATGT AATTGCCGCA GACGATCGTT TATTTCTTTG GCCGCTTGGA
ACACGCCCAA ACCACACCCC AAGCCTAACT GAATATGGGC TTTAA
|
|---|
| Protein sequence | MSRPPLPPFN EETAKRKIRL AEDGWNSRDP HKVALAYTEN CTWRNRAEFI SGRKAIIAML
TRKWIRELDY RLVKELWAYT ENRIAVRFAY EFRDDSNQWH RAYGNENWEF NKDGLMQCRI
ASINEHVIAA DDRLFLWPLG TRPNHTPSLT EYGL
|
|---|
| |