| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3395 |
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| Symbol | |
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| ID | 3966121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4327130 |
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| End bp | 4328017 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922492 |
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| Product | vibriobactin utilization protein ViuB |
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| Protein accession | YP_528862 |
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| Protein GI | 90023035 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2375] Siderophore-interacting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.472238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCTA ATTCGAGGCT AATACCCCCA AAAAAGCCAA GACGATTGCC ACCAATAATG
CTAACACTAG TAAACAGAGT TCAACTTTCT GAGGCATTGG TGCGTTTAAC CTTTACGGGG
GATGATTTAA CGCGTTTTAA AGGCGTACAT AAAGGCGCAC ACATTAAATT ATTTTTCGCG
CTAGCCCATC AAACTAAACC GGTGCTGCCC ACGCTAGGCG TTAATGGCCC AGAGTGGCCA
CCGCAAAACG AAAAGCCCAT TGTGCGTACC TACAGTTTGC GCGCGTATCG CGAAGAAAAA
AATGAAATCG ATATTGAATT TGTTGTGCAT GGTGAGGGCT GTGAAGCGAG CGCACATAGT
GTGGCCTCTT TCTGGGCGCA AACAGCAAAA ATAGGTGCAC ATATAGGCCT CGCTGGGCCG
GGTGGCCCAG TCCCGTTAAT ACAAGCTGCA CCTTGGCATA TATTGGCTGG TGACTTAACG
GCGCTGCCCG CCATAGCCGG TATTTTAGAA GAGCTGCCCG TTACGGCTAA AGGGTTAGCT
TTTATAGAGG TACCGAATTC AAACTTTGAA ATAGAACTTA AGTCGCTGCC TAATATGTTT
ATAAATTGGG TGCACTCAGA GCATCAAGTT AATGGCGAGG GTGGCGGCTT ACCCTTGGTT
AGTGCGGTTG AAAAGGTATT AAAAGGTGCA GCGCTTTGGT TTGGCTCGGC GGCGCCTTCG
GCTTTTATTG CTGGCGAAAA TGCTAGCACC GTAGCGTTGC GAGATGTATT GCGAGAGCGG
CTTGGGCTAA CCAAAAAAAA TTGTTATGCC GTACCCTATT GGCGAAGAGG GCAGAACGAA
GAAGCATACC ATCAACAGCG TCATGCAATT ATGGATCAGG TGTACTAG
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| Protein sequence | MESNSRLIPP KKPRRLPPIM LTLVNRVQLS EALVRLTFTG DDLTRFKGVH KGAHIKLFFA
LAHQTKPVLP TLGVNGPEWP PQNEKPIVRT YSLRAYREEK NEIDIEFVVH GEGCEASAHS
VASFWAQTAK IGAHIGLAGP GGPVPLIQAA PWHILAGDLT ALPAIAGILE ELPVTAKGLA
FIEVPNSNFE IELKSLPNMF INWVHSEHQV NGEGGGLPLV SAVEKVLKGA ALWFGSAAPS
AFIAGENAST VALRDVLRER LGLTKKNCYA VPYWRRGQNE EAYHQQRHAI MDQVY
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