| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3394 |
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| Symbol | |
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| ID | 3966120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4325861 |
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| End bp | 4327126 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922491 |
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| Product | GGDEF |
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| Protein accession | YP_528861 |
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| Protein GI | 90023034 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.50121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA ACTATCGTTA CAGAAATTGT TTTTTACTAT TAACCAGTAC GCTTACGGTA
ATGGCCGGTG CAACTATCGC CCCAGCGTTG CCGGGTATGT TAAGCGCATT TAGCGGTTAC
CCCAATGCCG AGTGGTTGGT GAAGTCATTG GTCACCTTGC CGGCGCTTGT TATTGTGTTG
CTTGCCCCTT TAGTGGGTTG GGTTGTAGAT AAATCCCATA AAAAATTGGT GCTAATAATA
TCCGTTGCTA TTTATGGCGT GGCAGGTGGC TCGGGTTATT TATTAAATGA AAGCCTGTTA
GCCATTTTTA TTGGCCGTTT ATTGCTTGGT GTTGCTGTAG CGGGGGTAAT GGTAAGCTGC
GGTGCGCTAA TTGCGGATTA TTTTAGCGGC CCAGAGCGCG CAAAATATAT GGGCTTAATG
GCAGCCTTTG GCAGTTTTGG TGGGGTGGTG TTTATGGGGC TTGGCAGTGT GTTGGCCGGT
TTTAGTTGGC AACTACCATT TACTATTTAT TTTGTGGCGC TGCTGCTGCT GCCTTTTATT
TGGTTTTTTA TTACCGAGCC GGTTATAGCC CAGCAGCCCG CTACCGAGGC CAAAGAGAGT
GGCGCATCCT TGCTGGCTGG TCAACAAGCA GATCTACAAT TGCCTCAACA GTCGCCTCGA
CAATCGCCAA CGGCTATTAA AAATAGCGTG CTTACTTTGT GCTGTGCGTT CGCCTGTATC
GAAGTGTTCG CACTGTATAT GATGCCTATT CACTTTCCCT TTTATTATAG CGATGTGACT
AATATTGCTC CAATCGGCGG CTTACCGTTG GCGGGCATGA TTATTACTTG GATGCTATTG
GTTATGTCTC TGGTGTCGTT TAATTTCGCT AAGTTGCGGC GCGGGTTTAA TTATTATCAG
CTGCAAATTG CTGGCCTAAG TTTGGTCGCG CTTGGCTATT TGTTTATTGC TTTTAAGCCA
GTATTCTCGC TTTGTTTTTT TTCCGCAACT ATCGCTGGTG TCGGGTTGGG CATAATGCGC
CCCAACGTGG TTATGTGGGT TATGTCTGCT ATTCCGCCGG CGCATAGGGG CAAGGCGATG
GGGGCGATTA CCTCCAGTGT TTTTATAGGT CAATTTATAT CGCCGTTGTT AACTCAGCCT
ATTGTACAAA TGTGGGGCTA CAGTGCGGTG TATGTATCGG TGGCGCTGTT GTTGTTCAGC
ATTGCTTTGG TTGTAGCAAT TGGCACTGCG TTGGTTAGCA GGTATACCGC TAAGGTGGGC
GTATAG
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| Protein sequence | MSSNYRYRNC FLLLTSTLTV MAGATIAPAL PGMLSAFSGY PNAEWLVKSL VTLPALVIVL
LAPLVGWVVD KSHKKLVLII SVAIYGVAGG SGYLLNESLL AIFIGRLLLG VAVAGVMVSC
GALIADYFSG PERAKYMGLM AAFGSFGGVV FMGLGSVLAG FSWQLPFTIY FVALLLLPFI
WFFITEPVIA QQPATEAKES GASLLAGQQA DLQLPQQSPR QSPTAIKNSV LTLCCAFACI
EVFALYMMPI HFPFYYSDVT NIAPIGGLPL AGMIITWMLL VMSLVSFNFA KLRRGFNYYQ
LQIAGLSLVA LGYLFIAFKP VFSLCFFSAT IAGVGLGIMR PNVVMWVMSA IPPAHRGKAM
GAITSSVFIG QFISPLLTQP IVQMWGYSAV YVSVALLLFS IALVVAIGTA LVSRYTAKVG
V
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