| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3372 |
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| Symbol | |
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| ID | 3965921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4298812 |
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| End bp | 4299249 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922469 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_528839 |
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| Protein GI | 90023012 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.911345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0274052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAACT CTGCTACAAC TAGTTTTACT CTTCGCGGTT TCACGCCCTA TGAGCCTGCT
GCTGACGAAG AATATATGTG TCAACAACAA CGAGAACACT TTAAAGGCCT GCTTCTCTCG
TGGAAACGTG AGTTGATGGA AGAGGTAGAT AGAACAGTAA GTCACATGAA AGACGAAGCT
GCTAACTTCC CCGACCCTGC CGACCGCGCC AGCCAAGAAG AAGAGTTCAG CCTTGAGCTG
CGCACTCGCG ATCGCGAGCG CAAGCTAATC AAAAAGATCG ACAGCACCTT AGAACTGCTG
GAATCTGACG ACTACGGCTT CTGCGACGCG TGCGGCGTAG AAATCGGCAT TCGCCGCCTA
GAAGCTCGTC CAACAGCCAC CCTTTGTGTT GACTGTAAAA CGATCGATGA AATCAAAGAG
CGACAAACCA AAGGTTAA
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| Protein sequence | MPNSATTSFT LRGFTPYEPA ADEEYMCQQQ REHFKGLLLS WKRELMEEVD RTVSHMKDEA
ANFPDPADRA SQEEEFSLEL RTRDRERKLI KKIDSTLELL ESDDYGFCDA CGVEIGIRRL
EARPTATLCV DCKTIDEIKE RQTKG
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