Gene Sde_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3370 
Symbol 
ID3965919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4297632 
End bp4297946 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID637922467 
ProductRieske family iron-sulfur cluster-binding protein 
Protein accessionYP_528837 
Protein GI90023010 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0252226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCCTA TTTGCAAAGT TAACGCGTTA AGCAATGGCG AAAGCTTGAG CTTTACACTC 
AACGACACCC CCTGTTTTAT TACCAAACAT AACGATCAAT TTTTCGCCTA CCAGAATGCT
TGCCCTCACT TAGGGGTAAC CATGGAGTGG CAACCCAATA GTTTTTTAGA TAGTGATAAA
GAACTCATCC AATGCTCTAT GCACGGCGCG CTGTTTTTAA TAGACAGCGG CGAATGTGTT
TACGGGCCAT GCCAAGGCAA GGCACTTACC CCTATCAAAA TTAGCCAACA GGGCGATACA
GTCTTTGCCG AGTAG
 
Protein sequence
MHPICKVNAL SNGESLSFTL NDTPCFITKH NDQFFAYQNA CPHLGVTMEW QPNSFLDSDK 
ELIQCSMHGA LFLIDSGECV YGPCQGKALT PIKISQQGDT VFAE