Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3370 |
Symbol | |
ID | 3965919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4297632 |
End bp | 4297946 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922467 |
Product | Rieske family iron-sulfur cluster-binding protein |
Protein accession | YP_528837 |
Protein GI | 90023010 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0252226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACCCTA TTTGCAAAGT TAACGCGTTA AGCAATGGCG AAAGCTTGAG CTTTACACTC AACGACACCC CCTGTTTTAT TACCAAACAT AACGATCAAT TTTTCGCCTA CCAGAATGCT TGCCCTCACT TAGGGGTAAC CATGGAGTGG CAACCCAATA GTTTTTTAGA TAGTGATAAA GAACTCATCC AATGCTCTAT GCACGGCGCG CTGTTTTTAA TAGACAGCGG CGAATGTGTT TACGGGCCAT GCCAAGGCAA GGCACTTACC CCTATCAAAA TTAGCCAACA GGGCGATACA GTCTTTGCCG AGTAG
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Protein sequence | MHPICKVNAL SNGESLSFTL NDTPCFITKH NDQFFAYQNA CPHLGVTMEW QPNSFLDSDK ELIQCSMHGA LFLIDSGECV YGPCQGKALT PIKISQQGDT VFAE
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