Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3364 |
Symbol | |
ID | 3965913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4293307 |
End bp | 4293843 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922461 |
Product | inorganic diphosphatase |
Protein accession | YP_528831 |
Protein GI | 90023004 |
COG category | [C] Energy production and conversion |
COG ID | [COG0221] Inorganic pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0851639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCA ATCTTGTACC CACCGGTAAA AAGGTGCCTG ACGAGGTAAA CGTAATTATT GAAATCCCTA TGGGCGGCGA GCCTATTAAG TACGAAATAG ACAAAGACTC TGGCGCTTTG TTTGTAGACC GCGTACTTGG CACCTCTATG CGCTACCCCT GCAACTACGG TTATGTGCCC CACACCTTGT GTGGCGACGG CGACCCTGTT GACGTATTGG TATACATGGA TCGCCCTCTA GTGCACGGTT CTGTTATCAA TTGTCGCCCA ATTGGCGTAT TGAAAATGAC CGACGAATCC GGTGAAGACG CCAAGATTGT TGCTGTACCT GTAAGCAAAA TCACCAGCAT TTACGACAAC GTTCAATCTA TTGAAGACTT GCCAGAAATC GCTACTCGCC AAATCGCTCA CTTCTTTGAA CACTACAAAG ATTTAGAAGC AGGCAAATGG GTTAAAGTTG AAGGCTGGGA AGGCGTAGCC GCTGCCAAGC AAGAGATTTT AGACTCTGTA GCAAACTACG AAAAAGAAGC TAAGTAA
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Protein sequence | MSLNLVPTGK KVPDEVNVII EIPMGGEPIK YEIDKDSGAL FVDRVLGTSM RYPCNYGYVP HTLCGDGDPV DVLVYMDRPL VHGSVINCRP IGVLKMTDES GEDAKIVAVP VSKITSIYDN VQSIEDLPEI ATRQIAHFFE HYKDLEAGKW VKVEGWEGVA AAKQEILDSV ANYEKEAK
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