Gene Sde_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3364 
Symbol 
ID3965913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4293307 
End bp4293843 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID637922461 
Productinorganic diphosphatase 
Protein accessionYP_528831 
Protein GI90023004 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0851639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCA ATCTTGTACC CACCGGTAAA AAGGTGCCTG ACGAGGTAAA CGTAATTATT 
GAAATCCCTA TGGGCGGCGA GCCTATTAAG TACGAAATAG ACAAAGACTC TGGCGCTTTG
TTTGTAGACC GCGTACTTGG CACCTCTATG CGCTACCCCT GCAACTACGG TTATGTGCCC
CACACCTTGT GTGGCGACGG CGACCCTGTT GACGTATTGG TATACATGGA TCGCCCTCTA
GTGCACGGTT CTGTTATCAA TTGTCGCCCA ATTGGCGTAT TGAAAATGAC CGACGAATCC
GGTGAAGACG CCAAGATTGT TGCTGTACCT GTAAGCAAAA TCACCAGCAT TTACGACAAC
GTTCAATCTA TTGAAGACTT GCCAGAAATC GCTACTCGCC AAATCGCTCA CTTCTTTGAA
CACTACAAAG ATTTAGAAGC AGGCAAATGG GTTAAAGTTG AAGGCTGGGA AGGCGTAGCC
GCTGCCAAGC AAGAGATTTT AGACTCTGTA GCAAACTACG AAAAAGAAGC TAAGTAA
 
Protein sequence
MSLNLVPTGK KVPDEVNVII EIPMGGEPIK YEIDKDSGAL FVDRVLGTSM RYPCNYGYVP 
HTLCGDGDPV DVLVYMDRPL VHGSVINCRP IGVLKMTDES GEDAKIVAVP VSKITSIYDN
VQSIEDLPEI ATRQIAHFFE HYKDLEAGKW VKVEGWEGVA AAKQEILDSV ANYEKEAK