| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3349 |
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| Symbol | |
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| ID | 3965898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4277571 |
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| End bp | 4278236 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922446 |
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| Product | phosphatase/phosphohexomutase-like |
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| Protein accession | YP_528816 |
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| Protein GI | 90022989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0143367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0340969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAG GCATAATATT CGACCACGAT GGCACGCTGG TTAAATCTGA GCACGAGCAC
TACAAAATTT GGCGCAGTAT TGTGCAGGAA TACGGGCACG ATTTATCGGA AGAAGTCTAC
ATTGCCAGCT ACTCGGGGGT TCCAACGGTA CAAAACGCCG AGCTTTTAAT CAATTCCTTC
GGTTTACCCC TTACGGTAGA AGCGCTGTGC GAGCGTAAAA AACAAGATAT GGCGGCATTT
TTGGCCACCG GCTCGTTCGA AACCATGCCT TATGCCAAGG AAATTTTAGC CCGCTGCCAA
GCGCTAGGGC TCAAGCAGGC TATAGCATCT GGTGCCAAGC GAGCAGAAAT CGATCACTCC
CGCGCCGCGC ACAACTACGA CGCTTACTGC GAAGCTTTTG TCACCTACGA GGATGTAGCC
CAAAGTAAAC CCGCACCCGA TGCCTATATA CTCGCAGCCC GCCTGCTTGG GTTAGAAATA
AACGAATGCA TAGCGGTGGA AGATAGCTTC AGCGGCGTTA CCTCTGCCAA GGCGGCCAAT
ATGTACTGCA TCGCTATTCC CAATGCTTAT TCAGCCAAAC AAGATTTAAG TGCAGCAGAT
ATTCAACTGC CTTCACTTGA AGCTGCATGC GAACATATCG AAACACTAGT GACAAAAAGC
GCCTAA
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| Protein sequence | MIKGIIFDHD GTLVKSEHEH YKIWRSIVQE YGHDLSEEVY IASYSGVPTV QNAELLINSF
GLPLTVEALC ERKKQDMAAF LATGSFETMP YAKEILARCQ ALGLKQAIAS GAKRAEIDHS
RAAHNYDAYC EAFVTYEDVA QSKPAPDAYI LAARLLGLEI NECIAVEDSF SGVTSAKAAN
MYCIAIPNAY SAKQDLSAAD IQLPSLEAAC EHIETLVTKS A
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