| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3341 |
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| Symbol | |
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| ID | 3965890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4269232 |
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| End bp | 4271091 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922438 |
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| Product | PAS/PAC sensor signal transduction histidine kinase / peptidoglycan glycosyltransferase |
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| Protein accession | YP_528808 |
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| Protein GI | 90022981 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.198786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0253146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGG CAGCTAAAGA CCTGCACCGA TTTAAAGATC ACCACAACGA GGCTAGGGTA
TTTGGCGGCC GCGTATTTGT GGCGCTTTTT TTCGTGCTGG TTTTATTTGG GGTGCTTATT
GCGCGCTTTT ACAGCCTGCA GGTTGTGCAG TATCAAGATT ACGCCACCCG CTCCGATTTA
AACCGCATTC AAGTTCGCCC AGTACCGCCC AATCGCGGTT TAATTCTCGA TCGCAACGGC
GAAATTCTTG CCCTTAACTC TCCTAGTTTT ACCTTATCGC TGGTAAAAGA GCGCATTAAA
AACCTGGAAG AAACCCTAGC GCAAATCGAT GCCTTGGTGC CTATTTCCGA CAGCGATCGC
GAATCGTTTT ACAAACTGCT CAAGCAGCGC CGTCGCCCCT ACGAGCCCAC ACCACTGCGC
TACAACCTCA CCGAAGAAGA AATAGCGCGC ATTGCGGTAA ACGAATACCA ATTAAACGGG
GTGGAGATTC AAGCGCAATT GGTGCGCCAA TACCCCAAAG GTGAAGTGTT TGTGCACGCG
GTTGGTTATG TGGGCCGCAT TAACGAGCGT GAACTTAGCC GATTTACCCA AGAAGAATAC
GAGCTGTACA CCGGCACTCA CAGCATAGGT AAAACGGGGC TAGAGCGGCA GTACGAAATG
GAATTGTTGG GCCGTGTAGG CTCCGAGAAT ATCGAAACCA ATGCACTGGG CCGCGTGCTT
AAAGTGTTGG ATCGCACCGA CCCAGAGCCG GGCAAAGACT TGCAATTGTT TTTGGATAGC
AAAGTGCAAC AAACCGCGCT GGAGCAGCTT GGCGATCAGC GCGGTGCAGT GGTGGCCATA
GACATAGAAA CAGGCGGCAT ACTGGCGTTA GTAAGCACGC CTAGCTACGA CCCCAATTTA
TTTGTTACCG GTATTAGCTA TAAAGATTAC AACGCGCTGA ATCAGTCGAA AGATTTACCC
CTGTTCAACC GCGCAATTCA AGGCCAGTAC CCGCCTGGTT CCACGGTAAA GCCCATGCTG
GGCCTGGGAG GTTTAGAAAG TAAAATCGTA AACTTCCGCA CAACTATCTT CGACCCCGGT
TTTTATCAGT TAGAAAACGA CGAGCGTTTT TATCGCGAGT GGAAAAAGGG CGGCCACGGC
TCGCGCGTGG ACCTACGCGA GGCGATTGTT GAATCCTGTG ATATTTATTT CTACGACCTA
TCGTTTCGTA TGGGCGTAGA TAAAATGCAC GCCTTTGGTT TGAATTTTGG CTTGGGCAGT
CGCACAGGCT TAGATATTCC CAGTGAGCGG CCGGGTAACT GGCCTTCGCG CGCTTGGAAG
AAGGGGTATC GCGGTGTTTC TTGGTACCCT GGCGACAGTT TGAACATGAG TATTGGCCAA
GGCGATGTAT TGGCAACACC GCTGCAGCTT GCTGTTATGA CTGCAACGCT GGCAACGCGA
GGCACATTAA TTAAGCCGCG TTTAGTGAAG CAAATTGGCG ATACGCCTAC CGAAAAAGAA
ATACTCGGTG TATTAGAAGC AGATTCTGCC AACTGGGATT ATGTACTCGA AGCAATGGAG
GGGGTGGTGC ATGATCGCAA TCACGGCACC GCGCGCGCTA TTAGCCGCAA CCTCAGTTAT
CGCATAGCCG GTAAAACCGG TACCGCGCAA AAAGTAGGTA TTGCGCAAGA TGCCGAATAC
GAGAGCGATA AGATCTCGGC GCGCAATCGC GATCACGCAT TATTTGTCGG TTTCGCGCCA
GCAGATAACC CCAAAATTGC GGTTGCAGCA ATTGTAGAAA ACGGCGAATC GTCGGGTATT
CCCGCCGCCA TCGTTAAGGA GGTGATGAAT GCGTATTTAC TTCCAATGGA GGGCGAATAA
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| Protein sequence | MSWAAKDLHR FKDHHNEARV FGGRVFVALF FVLVLFGVLI ARFYSLQVVQ YQDYATRSDL
NRIQVRPVPP NRGLILDRNG EILALNSPSF TLSLVKERIK NLEETLAQID ALVPISDSDR
ESFYKLLKQR RRPYEPTPLR YNLTEEEIAR IAVNEYQLNG VEIQAQLVRQ YPKGEVFVHA
VGYVGRINER ELSRFTQEEY ELYTGTHSIG KTGLERQYEM ELLGRVGSEN IETNALGRVL
KVLDRTDPEP GKDLQLFLDS KVQQTALEQL GDQRGAVVAI DIETGGILAL VSTPSYDPNL
FVTGISYKDY NALNQSKDLP LFNRAIQGQY PPGSTVKPML GLGGLESKIV NFRTTIFDPG
FYQLENDERF YREWKKGGHG SRVDLREAIV ESCDIYFYDL SFRMGVDKMH AFGLNFGLGS
RTGLDIPSER PGNWPSRAWK KGYRGVSWYP GDSLNMSIGQ GDVLATPLQL AVMTATLATR
GTLIKPRLVK QIGDTPTEKE ILGVLEADSA NWDYVLEAME GVVHDRNHGT ARAISRNLSY
RIAGKTGTAQ KVGIAQDAEY ESDKISARNR DHALFVGFAP ADNPKIAVAA IVENGESSGI
PAAIVKEVMN AYLLPMEGE
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