| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3300 |
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| Symbol | |
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| ID | 3965811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4210403 |
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| End bp | 4211767 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922397 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_528767 |
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| Protein GI | 90022940 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.170936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAT CCACTACCGC TAAGCCCACC AAAAAGCTAT ATATCCAAAC CCACGGCTGC
CAGATGAACG AGTACGATTC ATCGCGTATG CGCGACCTGC TGGGCGCTTC CCACGATATG
GTGCCAACCG ACAACCCAGA GGAAGCCGAC GTACTTTTGG TAAATACCTG CTCTATTCGC
GAAAAAGCGC AAGAAAAGCT ATTCCACCAA CTGGGTCGCT GGAAACACCT AAAAGAAGCC
AAGCCAGACC TCGTAATTGG TGTTGGTGGC TGTGTAGCAA GCCAAGAGGG CGACGCTATC
TCTAAACGCG CACCGTTTGT AGACCTTATT TTTGGCCCAC AAACACTGCA CCGCCTGCCA
GAGATGATTG AAACCCCACG CGAGAACGGC GCAGTTGTAG TTGATATTAG CTTCCCTGAA
ATTGAAAAAT TCGACAATTT GCCCGAGCCA GAAGCCGATG GCGCCACCGC GTTTGTGAGC
GTGATGGAAG GCTGCAGCAA ATACTGCACA TTCTGCGTTG TGCCCTACAC CCGCGGCGAA
GAAGTGAGCC GCCCAGCAGT AGATGTATTG CGCGAAGTTA CCCACCTAGC TAGCCAAGGC
GTGCGCGAAG TAAACCTATT GGGCCAAAAC GTAAACGCCT ACCGCGACGA CAGCTCTGGC
GAAGTAATCG ACCTTGCCGA GCTAATTGCT GCCGTTGCAG ACATAGACGG CATAGACCGC
ATTCGCTTTA CTACCTCGCA CCCTATGGAG TTCACCGAAA GCTTAATTCA AGCCTACGCC
GAAATCCCCG AGTTAGTCAG CCACTTGCAC CTGCCGGTAC AGAGCGGTTC TGACCGTATT
CTAAGTGCCA TGAAGCGCGG CCACACATGC TTAGAGTACA AATCTAAGCT GCGTAAAATA
CGTGCCCTAC GACCAGACAT TAGCTTCTCA TCTGACTTTA TTATTGGCTT CCCCGGTGAA
ACTGAAGCCG ATTTTGCCGC CACGATGAAG CTAATTGAAG ACATAGGCTT TGATAACTCC
TTTAGCTTTA TTTATAGCCC GCGCCCCGGC ACCCCCGCTG CCGACTTGCC CGACGACACC
CCAGAGCAAG TTAAAAAGGA TCGCCTAAAA ATATTGCAAA CACGCATTAT TCAGCAGGCG
CAGGAAATTA GCCGTCGCAT GGTAGGCAAC ACCGAACGCG TTTTGGTAAC TGGCTACAGT
AAAAAAGACC CAGGCCAGCT ATCTGGCAGA ACAGAAAACA ACCGCGTGGT GAACTTCCGC
TGCAATCAAC CAGAGCTTAT TGGCAAATTT GCAGATATTC TTATTGAGGA AGCACTTCCT
AACTCGCTGC GCGGCGTATT GCTTGGGTCT GAACTAGACG ACTAA
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| Protein sequence | MSESTTAKPT KKLYIQTHGC QMNEYDSSRM RDLLGASHDM VPTDNPEEAD VLLVNTCSIR
EKAQEKLFHQ LGRWKHLKEA KPDLVIGVGG CVASQEGDAI SKRAPFVDLI FGPQTLHRLP
EMIETPRENG AVVVDISFPE IEKFDNLPEP EADGATAFVS VMEGCSKYCT FCVVPYTRGE
EVSRPAVDVL REVTHLASQG VREVNLLGQN VNAYRDDSSG EVIDLAELIA AVADIDGIDR
IRFTTSHPME FTESLIQAYA EIPELVSHLH LPVQSGSDRI LSAMKRGHTC LEYKSKLRKI
RALRPDISFS SDFIIGFPGE TEADFAATMK LIEDIGFDNS FSFIYSPRPG TPAADLPDDT
PEQVKKDRLK ILQTRIIQQA QEISRRMVGN TERVLVTGYS KKDPGQLSGR TENNRVVNFR
CNQPELIGKF ADILIEEALP NSLRGVLLGS ELDD
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