Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3276 |
Symbol | |
ID | 3965768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4184499 |
End bp | 4185350 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922373 |
Product | hypothetical protein |
Protein accession | YP_528743 |
Protein GI | 90022916 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000378061 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00588252 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGGTA TTAAAACGCT AACCGCGCTG CTAGTGGTTA TATGCTTCAG TCAGGTATCT GTGGCTGAAG ACATTCGCAT TAATAAAGTG GCAGGTGAAA AAGAAGAGCT GCTGCTGTCT GTGCTTGAAC TGGTGTGGAG CAAAGCAGAC CCCAACGGAA AAATTATTCA ATTAAACGAT GAGCTGCCTG TTAGCCGCCT ACCTGTAGAG GTCGAAAGTG GCGCTATAGA TTTAATGTGG GCAGGCGCCT CGGCCAAAAA CGACGAGCAG ATGTTGGCGG TACGTATTCC TTTGTTAAAG GGTATGTTGG GTCATCGCAT TTCCATTATT CGCCAAGGCG ATCAGCACAA ATTTAACGAT ATACGCTCAA TTTCAGATTT AGCGCGCCTC GATGCTGGCA TGGGCCGTAC TTGGGGCTCG ACCAAAGTAT TAGAGCAGGC CGGGCTTAAT GTTGTTACGG CGATGAAATA TGAAAATTTA TTTCATATGT TGGAAGGGGG GCGGTTCGAC TATTTTCCGC GGGGTATACA CGAGCCTTGG GCCGAATTAG CTAAGTACCC AGAGCTACCT CTAGAAGTAG AAAAACGTAT TTTACTTATT TACCCCTACG CAATGTATTT TTATTTGCAA AAAGATAACC GCGCATTGCA CGCAAAACTT ACGCGTGGTT TTGAACAAGC CATTGCTGAT GGCAGCTTTG ATGAATTGTT TTATAGCGCA CCAATGGTTA AGCAGGTTAT TGAAAAAGGC AATATTAAAG ATCGCATAGT ACTGCGCATG CCAAATAATG AAATGCACAA GGATACACCT GTAGATCGCC CCGAACTCTG GCTCGACGTT AACAAACTAT AA
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Protein sequence | MFGIKTLTAL LVVICFSQVS VAEDIRINKV AGEKEELLLS VLELVWSKAD PNGKIIQLND ELPVSRLPVE VESGAIDLMW AGASAKNDEQ MLAVRIPLLK GMLGHRISII RQGDQHKFND IRSISDLARL DAGMGRTWGS TKVLEQAGLN VVTAMKYENL FHMLEGGRFD YFPRGIHEPW AELAKYPELP LEVEKRILLI YPYAMYFYLQ KDNRALHAKL TRGFEQAIAD GSFDELFYSA PMVKQVIEKG NIKDRIVLRM PNNEMHKDTP VDRPELWLDV NKL
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