Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3264 |
Symbol | |
ID | 3965756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4164427 |
End bp | 4165575 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637922361 |
Product | sodium-proton antiporter NhaA |
Protein accession | YP_528731 |
Protein GI | 90022904 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000713954 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTCAAC AAGAAACCGC TGGGGGCGTT TTACTCATAG CTGCCTCTAT ACTGGCCTTA ATATTTGCCA ACTCTTACTT AAGCGGCTTT TATAACGGCG TACTAAATCT ACCCTTGGTT GTCGCTATAG GCGCATTCGA AATTTCAAAA CCACTGTTGT TATGGGTTAA CGACGGGTTA ATGGCACTAT TCTTCTTAAT GGTAGGCCTG GAAGTTAAAC GCGAGGTGCT CGAAGGGCAT CTTTCTCAGC CAAGCCAAGT GGTGCTGCCC GGCTTAGCGG CATTGGCAGG CGTGGCATTC CCAGCTATAA TTTATGCAAG CTTTAACTGG CAAGACCCTA CAGCACTAAG GGGTTGGGCT ATTCCCTCCG CGACGGATAT CGCGTTTGCC CTAGGCGTTT TTAGTCTTTT CGGGCGTCAT CTACCTGTAT CGCTTAAGCT CTTTTTGTTA TCGGTTGCTA TATTTGATGA TATTGCAGCT ATTGTGATTA TTGCTTTGTT CTATTCTCAC GAGCTTTCTA CGCTATCGCT CTTAGTTGCA GGCATTGGCA TAGTAATGCT GTTTGTGTTG AACCGCTTAA AAATACGACA TGTTTCACCT TTTATGTTTG TTGGCCTAGT AGTGTGGGCC GCGGTTTTAA AATCGGGTGT GCACGCCACG CTGGCGGGCT TCGTTATTGC CTGGTTTATC CCGCTTAAAC ATAAAAATAT ACATGATGAG CCCATGTTGC TGTCGCTAGA GCATGCTTTG CAGCCTTGGG TAGCCTATTT TATCTTGCCA TTCTTTGCTT TTGTGAATGC GGGTGTGCAC CTAGGTGGCA TAGGTTTAGA TACGTTAACA GCCCCTGTGA CGTTGGGCAT AATTGTTGGC TTATTCGTGG GTAAACAGCT GGGTATATTT AGTGTATGTT GGTTAAGTAT TAAATTGAGA ATAGCTAAGC TGCCCGAAGG CGCGACCTGG CGAGAGCTAT ACGGCGTGTG TTTGCTGGCG GGTATTGGTT TTACCATGAG CTTATTTATA GGTAGCCTTG CTTTTGAGGG TGCCAATAGT GAAATGGTTG CAAGTGTTAA ATTAGGCGTG CTGTTTGGTT CTCTGTTGTC TGCTATATGT GGTGCGCTGA TTCTAACCAA CTCAAGGAAA ATAAAATGA
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Protein sequence | MAQQETAGGV LLIAASILAL IFANSYLSGF YNGVLNLPLV VAIGAFEISK PLLLWVNDGL MALFFLMVGL EVKREVLEGH LSQPSQVVLP GLAALAGVAF PAIIYASFNW QDPTALRGWA IPSATDIAFA LGVFSLFGRH LPVSLKLFLL SVAIFDDIAA IVIIALFYSH ELSTLSLLVA GIGIVMLFVL NRLKIRHVSP FMFVGLVVWA AVLKSGVHAT LAGFVIAWFI PLKHKNIHDE PMLLSLEHAL QPWVAYFILP FFAFVNAGVH LGGIGLDTLT APVTLGIIVG LFVGKQLGIF SVCWLSIKLR IAKLPEGATW RELYGVCLLA GIGFTMSLFI GSLAFEGANS EMVASVKLGV LFGSLLSAIC GALILTNSRK IK
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