| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3257 |
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| Symbol | |
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| ID | 3965748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4155881 |
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| End bp | 4156513 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922353 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_528724 |
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| Protein GI | 90022897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00633944 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAACG AAGACTTTAT ATTAAACGCC GAAGCGCGCG ATGTTTCAGG GAAAGGTGCG
AGCCGCCGCC TGCGTCGTGA AGCTGGTTTA GTGCCTGCCA TCGTATATGG CGGTCGCAAA
AACCCACAAA ACGTAACCAT CACATTACGT GAGCTTACCA AGCACTTAGA AAACGAAGCA
TTTTACTCTC ACATCATCAC CTTAAACATT GGTGACAGCA GCGAGCAAGT AATCTTAAAA
GACCTTCAGC GTCACCCAGC AACTAACTTT GCTATGCACG CTGACTTCTT GCGCGTTTCT
AAAACCAAGA AGTTCAACAC CAAAGTACCT TTGCACTTTA TTAACGAAGC AACCTCTAAG
GGCGTTAAAG AGCAAGGCGG TAAAGTACAG CACAGCATGA CCGAGCTAGA AATTGCTTGT
TTACCAGCTG ACTTACCAGA GTTCATCGAA GTAGATTTAG CAAACGTAGA GTTGGGCGGC
ATCGTTCACA TCTCTGATAT CGTTTTGCCA AAAGGCGTTG AATCTATCGC TCTACAACAA
GGCGAAGACC ACGACCTACC TGTAGCGTCT ATCTTCAAGC CTAAAGGCGT AGCTGGCGAC
GAAGACGAAG AGGCAGAAGG CGACGCAGAG TAA
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| Protein sequence | MSNEDFILNA EARDVSGKGA SRRLRREAGL VPAIVYGGRK NPQNVTITLR ELTKHLENEA
FYSHIITLNI GDSSEQVILK DLQRHPATNF AMHADFLRVS KTKKFNTKVP LHFINEATSK
GVKEQGGKVQ HSMTELEIAC LPADLPEFIE VDLANVELGG IVHISDIVLP KGVESIALQQ
GEDHDLPVAS IFKPKGVAGD EDEEAEGDAE
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