| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3251 |
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| Symbol | prfA |
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| ID | 3965741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4148728 |
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| End bp | 4149810 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922346 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_528718 |
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| Protein GI | 90022891 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.227833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0955024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGT CGATTTTAGA AAAATTAGAG CATTTGGCCG AACGGTTCAC CGAGGTGGGC
GCCCTAATGG GGGACCCAGA TGTTATCTCT AACCAAGATA AATTTCGTGA CCTAGGCCGC
GAATACGCAG AGCTAGAACC CGTAATTAAA TGCTATAACG AGTACAACAC TGTTTTGGGC
AATATAGCCG AAGCCAAAGT ACTTATTAGC GATAGTGACC CAGATATGCG GGCAATGGGA
CAAGATGAGC TAAAAGAAAA CGAAGCCGCA TTAGAGCCGC TAGAGTTAGA GCTGCAAAAG
CTTTTGTTAC CCAAAGACCC GAACGATGGC AAAAACGTAT TCTTGGAAAT TCGCGCCGGT
ACCGGTGGTG ATGAGGCTGC GATTTTTTCT GGCGATTTGT TCCGCATGTA TTCGCGTTAT
GCTGAATCTA AAGGTTGGAA GGTTGAGATA ATCAGCGAAA ACCAAGGTGA GCACGGCGGC
TATAAAGAGA TTATTACTCG CGTAGTGGGC CAAGGCGTAT ATTCAGAATT AAAATTTGAA
TCTGGTGCGC ACCGAGTACA GCGTGTTCCC GAAACGGAAT CGCAGGGCCG TATTCATACG
TCTGCTTGTA CTGTAGCGGT AATGCCCGAA GCCGATGAAA TGGCGGAAGT GAATATCAAT
AAAGCCGATT TGCGCATAGA CACCTTCCGC GCAAGTGGTG CGGGTGGTCA GCACGTTAAC
AAAACGGACT CAGCAATACG TTTAACGCAC ATACCTACAG GTGTGGTGGT GGAATGCCAG
GATGAGCGCT CGCAGCATAA AAACCGCGCC AAGGCTATGT CGTTATTGGC GTCGCGTTTA
AGTATGGCGC AAGAAGAAAA AGCTGCCGCC GAGCAAGCGA GTGCGCGTAA AAGTTTAGTT
GGTAGTGGCG ACCGCTCCGA GCGTATTCGC ACCTACAATT TCCCGCAGGG GCGCGTTACC
GATCACCGTA TTAATTTAAC GTTATACAAA TTAGACGAAG TGATGCAAGG CGCATTGGGT
GATGTTATTC AGCCGTTGGT AAACGAGTAT CAAGCAGATC AGCTCGCCGC ATTAAGTGAA
TAA
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| Protein sequence | MKASILEKLE HLAERFTEVG ALMGDPDVIS NQDKFRDLGR EYAELEPVIK CYNEYNTVLG
NIAEAKVLIS DSDPDMRAMG QDELKENEAA LEPLELELQK LLLPKDPNDG KNVFLEIRAG
TGGDEAAIFS GDLFRMYSRY AESKGWKVEI ISENQGEHGG YKEIITRVVG QGVYSELKFE
SGAHRVQRVP ETESQGRIHT SACTVAVMPE ADEMAEVNIN KADLRIDTFR ASGAGGQHVN
KTDSAIRLTH IPTGVVVECQ DERSQHKNRA KAMSLLASRL SMAQEEKAAA EQASARKSLV
GSGDRSERIR TYNFPQGRVT DHRINLTLYK LDEVMQGALG DVIQPLVNEY QADQLAALSE
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