Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3229 |
Symbol | |
ID | 3965702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4102597 |
End bp | 4103190 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922326 |
Product | hypothetical protein |
Protein accession | YP_528698 |
Protein GI | 90022871 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.474421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.780413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTTA AGCAAGTACG AAAAGCGATA GCGAAAGTTT TTTCAATTGT GTTCTTATCG GCTGCGGCAA CCGCGCAAGC TAATGGACCT GCGCCAGGTA ATTATGCAAT CGACGCTTCG CACACGAGTG TAGTTTTCGC TGTGGATCAT ATGGGCTATA GCGATGTGTT AGGCCGGTTT AATGAGTTAG AAGGCAGTGT GCAGGTAGGT AGTAGCGGGG AGGCAACCAT TAACATGGTA ATAAAAGTGG GCAGTATCGA TTCTAATCAC GCAAAGCGCG ATGAGCATTT GCGCAGCCCT GATTTTTTTA ACGCACGTCA GTTCCCCGAA ATAAAAATAA CTGGCCCACT TAGCTTTAAG CGTTTGAATG GTAAAAGCGA GCTAGTCGCG AAGGTAACGC TACTGGGTAT TACCAAAAAT GTGCACTTCG AGCTTGAAGA AGGCAAGCAA GGCAAAGATC CATGGGGTTT AGAGCGAGTG GGTTATACCG CTATTGGCAC CCTTAAGCGC AGTGATTTTG GTATGAACTT TATGCAAGGT GGCATTGGCG ATGAGGTATT GCTAACCGTA AACCTAGAAG CCATTAAGCA GTAA
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Protein sequence | MSVKQVRKAI AKVFSIVFLS AAATAQANGP APGNYAIDAS HTSVVFAVDH MGYSDVLGRF NELEGSVQVG SSGEATINMV IKVGSIDSNH AKRDEHLRSP DFFNARQFPE IKITGPLSFK RLNGKSELVA KVTLLGITKN VHFELEEGKQ GKDPWGLERV GYTAIGTLKR SDFGMNFMQG GIGDEVLLTV NLEAIKQ
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