| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3226 |
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| Symbol | |
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| ID | 3965699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4100324 |
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| End bp | 4101097 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922323 |
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| Product | hypothetical protein |
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| Protein accession | YP_528695 |
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| Protein GI | 90022868 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.849662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCTA AGTTAGACCC AGATGCAAGT GTTGATGAAG GCCAACCGCT AATTCAACAC
CTTATAGAGC TGCGTTCACG CTTATTAAAG TCTGTTGCTG CTATATTTTT AATCTTTATA
TCGTTATTTT ATTTCGCCAA TAAAATATAC GATTACGTGG CCGCGCCACT GGTAGAACTG
CTACCAGAAG GCAATATGAT TGCCACCAAT ATTACGTCTA CTTTTTTAAC GCCGTTTAAA
CTCACGCTGT TTGTTTCTGT ATTTGTAGCC ATGCCCTACG TGCTTTGGCA AATATGGAAT
TTTATAGCCC CAGCCTTGTA CCAGCGCGAA AAACGCTTGG CCATGCCGCT GTTTATTTCC
AGCGTAATTC TTTTTTACGC AGGCGTAGCC TTTGCGTATT ACGTAATATT CCCGCTTATC
TTTTTGTTTT TTACCACTAC TGCGCCTAGC TCAGTAACGG TAATGCCCGA TATCGCCTCG
CACCTAACCT TAGTAATTAA ACTGTTTTTT GCGTTTGGCT TAGCATTTGA AATTCCGGTG
GCAACCGTCA TGTTAATAGC CGCGGGAGTA ATTTCACCGC AAAAACTCGC CAATAAACGC
CCCTACGTAA TAGTGGGCTG TTTTGTAATT GGCATGCTAC TTACACCGCC GGATATCATC
TCGCAAGCAC TGCTCGCTAT ACCCATGTGG ATTTTATTCG AAACCGGCAT CTTTTTTGGT
CGCCTAGTTG TTCGCAACCA GAAAGCGACA GAAAGTGAAG AGCAAGCCAG CTAA
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| Protein sequence | MTAKLDPDAS VDEGQPLIQH LIELRSRLLK SVAAIFLIFI SLFYFANKIY DYVAAPLVEL
LPEGNMIATN ITSTFLTPFK LTLFVSVFVA MPYVLWQIWN FIAPALYQRE KRLAMPLFIS
SVILFYAGVA FAYYVIFPLI FLFFTTTAPS SVTVMPDIAS HLTLVIKLFF AFGLAFEIPV
ATVMLIAAGV ISPQKLANKR PYVIVGCFVI GMLLTPPDII SQALLAIPMW ILFETGIFFG
RLVVRNQKAT ESEEQAS
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