| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3161 |
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| Symbol | |
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| ID | 3965595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4037279 |
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| End bp | 4039522 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922258 |
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| Product | glutamyl-tRNA(Gln) amidotransferase A subunit |
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| Protein accession | YP_528630 |
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| Protein GI | 90022803 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex
[COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.389145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATT GGCTTGCTGG TTTATGGGGT TGGATAGACG AACGTCTACC CGTGCAGCGT
GCATGGGATA CCCACATGGG CAAATACTAT GCCCCTAAGA ATTTTAACTT TTGGTACTTC
TTTGGTGTGC TTTCTCTTTT AGTGCTGGTT AACCAGTTGC TAACGGGTAT TTGGCTCACT
ATGAATTACG TTCCTTCTGC CGAAGAGGCG TTTGCCTCTG TAGAATACAT CATGCGCGAT
GTGCCCTACG GCGATACCCT ACGCTATTTG CACTCCACTG GTGCCTCTGC GTTCTTTATT
GTCGTATACC TGCATATGTT CCGCGGTTTG ATGTACGGCT CTTACCGCGC GCCACGCGAG
TTGGTGTGGA TTTTCGGTAT GTTTATCTAC GTTGCACTTA TGGCCGAAGC CTTCTTGGGT
TACGTTCTAC CTTGGGGGCA AATGTCTTAC TGGGGTGCAC AGGTAATTGT TAACCTGTTT
GGTGCTATAC CATACGTAGG TGAAGACCTA GTGCAATGGA TTCGCGGCGA CTACCTCATA
TCTGGTGCAA CCTTAAACCG CTTCTTCGCC TTACACGTTG TGGCTATCCC CATTGTGTTG
CTTGCATTGG TTGTATTGCA TATTTTGGCG TTGCACGAAG TGGGTTCTAA CAACCCAGAC
GGCGTAGAAA TTAAGAAAAA CAAAGATGAA AACGGTATTC CGCTAGACGG CATTCCTTTC
CATCCTTACT ACACCGTGCA CGATTTGGTG GGTATAACTG TCTTCTTGTT TGCATTCTGT
GGTGTTGTGT TCTTCGCGCC AGAAATGGGC GGTATGTTCT TAGAGCACGC AAACTTCGAG
CAGGCGAACG GCCTTAAAAC TCCTGAGCAC ATTGCTCCGG TTTGGTACTT CACACCATTC
TATGCGGTAC TGCGTGCAGT AACGTTCGAT TTGGGTGGCG TGTTTACCTC TAAGCTGCTT
GGCTTTGTTG CAATGGCCGC TGCCATTGTG GTGCTTTTCT TCCTGCCTTG GTTGGATAAA
GCAAAATCGA AGTCTGTGCG TTACAAAGGT ATGTTGCCAA AAGTAATGCT AATTAAGTTT
GCAGCATGCT TCGTAATTTT GGGTGTGTTA GGTCTTAAGT CACCTACTGT AGAACGTACT
TTGCTCGCGC AAATTAGCAC TCTGTTCTAT TTTGCATTCT TCTTCAGTAT GCCTACTTGG
ACCAGTGCTG GCAGAAAGAG CTTCTTTGGT ATTGTTATTT GTATAGCGTT CGCCATATGG
ACAGCTTACG TTTCTGCGGT AACCTTAATA AGCTCTATGC ATGCGGCAGA AGGTTCTGGG
CACGGTGTAA ACTTGTTTGC ATACATCTAC GGCTTTGCAG TAGCGGCGTT TATTGCAGCT
ATTCCATGGT TGGCGGCTCG AGATGCAGAA ACACCAGTAC CTGAACGCGT TCAAATGAAA
GGCCTAAACC CAGTGTTGGT TTGGGGTGGT TTGATTCTGT TCTTGGCACT TGCTTTTGTT
CCATTAAAAG CAATTGGTGC CGAAGGCGGT GCTTGTGGCA CTGCAGCGTG TGAGCACTTT
GAAGCGGATG TTTCCGATAA AGAGTCATTG CAGCGCGGCG CTCAAGTATT TATGAACTTC
TGCATGGGCT GTCACTCTGC CAACTACTCT CGCTACGAGC GTGTTGCAGA TGACTTAGGC
ATCCCGCATC AATTAATGCT AGATAACTTA GTTTTTTCTG ATCAAAAGAT AGGTTCATTA
ATGAAAATAT CGATGACCCC AGAAAAATCT AAGCAGTGGT TTGGTGCTAC GCCTCCCGAT
TTATCGCTAG TTACACGTGC TCGTTCCTCT GAGTGGGTGT ACAACTTCTT AATCAACTTT
TACAAAGACG ATTCACGTCC AACAGGCGTT AACAACAAAG TTTTCGCTAA CGTGGGTATG
CCTCATGTGT TGATGGAGTT GCAGGGCTTG GCCGAGTGCG CGCCAGGGCC AAAACTAGAT
AGCCATGGCA AAGTAGTACG CGACCATTTG GGTGATACCA AAAACGCCCC TTGCGGTTCG
TTGGTTGTAG GTAGTGAAAA GGGCACGTTG AATGATGAGG AATACAAATC TACTGTTTAC
GATTTGGTTA ACTTCCTTAC TTATGTTGCC GAGCCTGGCG CAGAAAAGCG CAAGAAAACT
GGTATATTTG TATTTTTATT CTTAGGCGTA TTGTTGGTGT TCACTTGGTT ACTAAACCGT
GAATACTGGA AAGACGTACA CTAA
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| Protein sequence | MTNWLAGLWG WIDERLPVQR AWDTHMGKYY APKNFNFWYF FGVLSLLVLV NQLLTGIWLT
MNYVPSAEEA FASVEYIMRD VPYGDTLRYL HSTGASAFFI VVYLHMFRGL MYGSYRAPRE
LVWIFGMFIY VALMAEAFLG YVLPWGQMSY WGAQVIVNLF GAIPYVGEDL VQWIRGDYLI
SGATLNRFFA LHVVAIPIVL LALVVLHILA LHEVGSNNPD GVEIKKNKDE NGIPLDGIPF
HPYYTVHDLV GITVFLFAFC GVVFFAPEMG GMFLEHANFE QANGLKTPEH IAPVWYFTPF
YAVLRAVTFD LGGVFTSKLL GFVAMAAAIV VLFFLPWLDK AKSKSVRYKG MLPKVMLIKF
AACFVILGVL GLKSPTVERT LLAQISTLFY FAFFFSMPTW TSAGRKSFFG IVICIAFAIW
TAYVSAVTLI SSMHAAEGSG HGVNLFAYIY GFAVAAFIAA IPWLAARDAE TPVPERVQMK
GLNPVLVWGG LILFLALAFV PLKAIGAEGG ACGTAACEHF EADVSDKESL QRGAQVFMNF
CMGCHSANYS RYERVADDLG IPHQLMLDNL VFSDQKIGSL MKISMTPEKS KQWFGATPPD
LSLVTRARSS EWVYNFLINF YKDDSRPTGV NNKVFANVGM PHVLMELQGL AECAPGPKLD
SHGKVVRDHL GDTKNAPCGS LVVGSEKGTL NDEEYKSTVY DLVNFLTYVA EPGAEKRKKT
GIFVFLFLGV LLVFTWLLNR EYWKDVH
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