| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3142 |
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| Symbol | |
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| ID | 3965576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4017246 |
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| End bp | 4018148 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922239 |
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| Product | heat shock protein HtpX |
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| Protein accession | YP_528611 |
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| Protein GI | 90022784 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.8089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGTGT TACGCATTGG TTTGTTTTTA TTAACCAATA TCGCGGTAAT TGCTGTAGCG
AGTATTACTC TTAGTTTGCT TGGTGTTGGC AGTTACCTCG ATGAGTCTGG CAGCGGTTTA
AACCTGCAGG CACTGCTTAT TTTTTGCGGT GTGTTTGGGT TTACTGGTTC GCTATTTTCG
CTATTTATTA GCAAGTGGAT GGCCAAGCGC ACGACTGGCA CACGCATTAT TGATGTGCCG
CGTACTGCAG ATGAGCGCTG GTTATTAGAA ACGGTGCAGG AGCTAGCGCA AAAAGCCGGT
ATTGGTATGC CCGAGGTAGG TATCTTCCCA GCGCAACAGT CTAATGCTTT TGCTACAGGT
TGGAATAAAA ACAGCTCGCT TGTGGCCGTA AGCTCTGGCT TGTTAACGCG CTTTAACAAA
AACGAAGTGC GCGCGGTGCT TGCCCATGAA ATAGGCCACG TGGCTAACGG CGATATGGTT
ACCTTAGCGC TGATACAAGG TGTAGTGAAT ACCTTTGTGA TGTTCTTCGC TCGTATAATT
GGGCATTTTG TTGATCGGGC TATTTTTAAA ACCGAGCGCG GCCACAGCTT TGGCTACTAC
ATAGTTGTAT TTGTTACCGA GATGGTTTTG GCCGTATTGG CGAGCATGAT TGTGGCTTGG
TTCTCTAGGC GCAGGGAATA CCGAGCAGAC TACGCCGGTG CAACCTTGGC CGATCGCAAT
TCGATGATTG CGGCTTTAGC GCGTTTGCAG GCCGAAACTC AAGCTAAGGT GCCCAATGCC
ATGCCAGATA CCCTTACCGC ATTTGGTATC TCGTCTGGCT TTAGCAATAA AATGATGGGG
GCGTTTGCTA GCCACCCACC GTTAGAGGAT CGTATTCGCG CTTTGCAAAA CTTGCACTCT
TAA
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| Protein sequence | MSVLRIGLFL LTNIAVIAVA SITLSLLGVG SYLDESGSGL NLQALLIFCG VFGFTGSLFS
LFISKWMAKR TTGTRIIDVP RTADERWLLE TVQELAQKAG IGMPEVGIFP AQQSNAFATG
WNKNSSLVAV SSGLLTRFNK NEVRAVLAHE IGHVANGDMV TLALIQGVVN TFVMFFARII
GHFVDRAIFK TERGHSFGYY IVVFVTEMVL AVLASMIVAW FSRRREYRAD YAGATLADRN
SMIAALARLQ AETQAKVPNA MPDTLTAFGI SSGFSNKMMG AFASHPPLED RIRALQNLHS
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