| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3137 |
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| Symbol | |
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| ID | 3965537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4011089 |
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| End bp | 4012765 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922234 |
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| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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| Protein accession | YP_528606 |
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| Protein GI | 90022779 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH
[TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.785759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAATA TTGAGCCGAG TAATGTAAAA CCTAGCAATA TAGAGCTGGG CACTATTCCT
TTGGCAGAAG CGCCCGCTAC CAAGCTAGAA GCTGCTTATA TTGCTAAAAA AATAGCTCCA
AATAATTCTA ACCCCAATGC GCCTGTCTGG GTGTTTGTTC ATGGTTGGGG GGCAAGCGCC
AATACCTGGG CGCCGTTAGT AGACGAATTA AAATCGCAGT GTGAAATTTG GCTGTTAGAT
TTACCCAGCT TTGGTGGCAA CACGCAAGCT GTCAATAGCC CTAGCGCAGT TGCTGCAGAC
ATTGCCAAAA TATTGCCCGC TAATACTGTG CTTGTGGGGT GGTCGCTAGG CGGTATGCTG
CTGCCGCTAA TTGCCCAACA AATAGAACAA CATTGGCCCA CAAAAACAAT TAGCCATTGT
ATAGGCCTGG CCGCCAACGC CAAATTTGCG CAGGGCGATA ACTACACTGC TGCTATGCCT
GCAGAAACGT TTCAAACTTT TTGCGCTAAC TTTAATGTCG ACCCAACAAC AACTTGGTCG
CGCTTTGGCT TGTTGCAAGC TCAGGGCGAT AGCAACCGCA AACTTGTAAG CCGACAAATA
AAAGCGTTGC ACAATGCGCC TATGCCAGAG CAGTTTACTG CGTGGCAACA AGCCTTAACT
TGGTTGGGCG CTATAGATAA CCGTGTACTT CTCTGTGAAA TAACTACCCC ATTTTTACAC
CTATTTGGCG AAGGTGATGC GCTAGTACCA GCTGATGCAG CTGTCGCTAT GGCTGGTATC
AACCCTTTGC ACCAAACGCT CGTGGTAGCA TCCGCAGGTC ATGTTTTACA TTTTTCGCAA
CCCGCAAAAA TTGCGCAAAT AATGTTGGCC CGGGTGCATG CTAAACGCAA TAAAGCGCGG
GTGGCCAAGT CTTTTAGCAA CGCTGCAACC GAATACGATA GCGTTGCCTA CTTGCAGCAA
AAGCTAGCAA ATACCCTGTG TGAATGGGTG CCAGAGCAAG CAGAAAAGAT TGCCGACTTA
GGGTGTGGCA CAGGCTATTG CGGCTTGCAA CTACAACGCC CAGAGCGCGA TATTTATTCG
CTCGACTTGG CGCAGGGCAT GTTGCATACA GCGCGGTCGA AAGCTTTAGC TAAGCAGCAA
TTATTTTCAG GTGTGTGTGC CGACATAGAG TGCTTACCAT TTATCTCTAA CGGTTTTGAT
GCGTTAGTGT CTGGCATGAG TATGCAGTGG TGCGAAGATT TACCCGCAGT ATTTAGCGAG
GCGCATAGGG TGCTAAAGCC TAATGGTGAA ATGATTTTTT CTACCCTTGG CCCACAAACT
TTATTTGAAT TGCGCGAAGC GTGGGCCGAG GCAGATATAA AGTTAGGGCG GCAAGGTTGT
GTACACGTTA ATACTTTTAT CGAGTTAGAT CGTGTAGAAA TTGCAGCTAA GCAGGCTGGG
TTTGTTATAG AACAAACTTC GCGTGAAATA CACGTATTGA CTTACGACAG CGTAATGCCG
TTGATGCGCG AGCTAAAAAC TATCGGCGCG CATAATGTAA ACCCAGGTCA AGAACAGGGT
TTAACAGGTA AGGCGCGATT AAAAGCAATG GCGCAAGCGT ACGAGCAGTT TCGCACGGCG
CAAGGTGTGT TGCCGCTCAC CTACGAGGTA GGCTTTTATC AATTACTAAA AGTGTAA
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| Protein sequence | MSNIEPSNVK PSNIELGTIP LAEAPATKLE AAYIAKKIAP NNSNPNAPVW VFVHGWGASA
NTWAPLVDEL KSQCEIWLLD LPSFGGNTQA VNSPSAVAAD IAKILPANTV LVGWSLGGML
LPLIAQQIEQ HWPTKTISHC IGLAANAKFA QGDNYTAAMP AETFQTFCAN FNVDPTTTWS
RFGLLQAQGD SNRKLVSRQI KALHNAPMPE QFTAWQQALT WLGAIDNRVL LCEITTPFLH
LFGEGDALVP ADAAVAMAGI NPLHQTLVVA SAGHVLHFSQ PAKIAQIMLA RVHAKRNKAR
VAKSFSNAAT EYDSVAYLQQ KLANTLCEWV PEQAEKIADL GCGTGYCGLQ LQRPERDIYS
LDLAQGMLHT ARSKALAKQQ LFSGVCADIE CLPFISNGFD ALVSGMSMQW CEDLPAVFSE
AHRVLKPNGE MIFSTLGPQT LFELREAWAE ADIKLGRQGC VHVNTFIELD RVEIAAKQAG
FVIEQTSREI HVLTYDSVMP LMRELKTIGA HNVNPGQEQG LTGKARLKAM AQAYEQFRTA
QGVLPLTYEV GFYQLLKV
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