Gene Sde_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3126 
Symbol 
ID3965526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4000049 
End bp4000678 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID637922223 
Producthypothetical protein 
Protein accessionYP_528595 
Protein GI90022768 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG TGTCAATGAC TTCAAAGTCC TACCAAGCTT TGGCTGCGCC AGTGGAGTTT 
GTACACGAAG AAAAGCGCAG TACGTTTACG GCGCTGCTTT ATCCGGTAGA AAGCCGCGCA
CAAGCGATGG CGTATCTTGA GCAGGTAAAA GAAGTGTACC CAGGTGCAAG CCATTATTGT
TGGGCTTATA TTATTGGCTC GGCAGAGCAG CCGGTATCGG TGGCGTTTAG TGATGATGGC
GAGCCATCTG GAACGGCGGG CAAGCCAATG CTTAATGTTT TAACTCATCG CCAAGCGGGA
AATTGCTTTG CGGTAATTGT TCGAATTTTT GGTGGCGTTA AGTTGGGTGC GGGTGGTTTG
GTGCGCGCTT ATGGGGCTGC GGTGTCGCAA GCTTTGGATT CGGCGCAGTG GGAGCAGATA
ACCGAATTAA TTGCGTTTAG AGTGGAGATA AGTTTTGCAT TGGAGGAGCG TGTACGTCAC
AGGCTTCAGC AAGCGAATAT AACGGTAGAT GCTGCTGAGT ACGGTGAGCA CGTTACTCTG
TTTGCGAAAG CGGCGGCATC AATACTCGAG CAATTAGAGC AAGATATACC CCAATTAAGT
TCAGGCTCGG CCAAGGTGAT AGCGGAGTAA
 
Protein sequence
MSNVSMTSKS YQALAAPVEF VHEEKRSTFT ALLYPVESRA QAMAYLEQVK EVYPGASHYC 
WAYIIGSAEQ PVSVAFSDDG EPSGTAGKPM LNVLTHRQAG NCFAVIVRIF GGVKLGAGGL
VRAYGAAVSQ ALDSAQWEQI TELIAFRVEI SFALEERVRH RLQQANITVD AAEYGEHVTL
FAKAAASILE QLEQDIPQLS SGSAKVIAE