| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3103 |
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| Symbol | |
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| ID | 3965503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3964422 |
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| End bp | 3965078 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922200 |
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| Product | CheD, stimulates methylation of MCP proteins |
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| Protein accession | YP_528572 |
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| Protein GI | 90022745 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGG GATTAACAAG TAAAGCAGAT GCTCGTTTAA AGCCTGCGCT ACCAGGGTTT
ACCAATGTAT ACCGCTACTG GGATGCTCGT TTCGCTAAGG TGGCCGTAAA ATTACAGCCT
GGCGAATGCT ATGTAACTAA AAACGACGAA ATGTTAGTGA CTGTGCTGGG GTCGTGTATC
GCTGCGTGTA TCCGCGACCC AGTTGCCGGT GTAGGAGGTA TGAACCATTT TATGTTACCC
GAACAAGCCG CAGGGCATGA AATCACTCGC AATAGCTTGA GTAACCCCGA GCTGTGTTAC
GGCAACTGGG CGATGGAGCA CTTAATAAAT AGCATTATTA AATGCGGCGG TATGCGCAAT
AGGCTGGAGA TCAAATTATT CGGCGGCGGG CGGGTGCTGG CAAATATGGT GCGCATGGAT
ATAGGCCAGC GCAATATAGA ATTTGTAGAA AGCTTTTTAG CTAATGATGA ACTGCCTGTT
ATTGCAAAAG ATTTAGGCGG TAACTACCCA AGAAAAATTC TTTATTTTGC CGCAACAGGG
CAAGCCAAAA TGAAAAAAAT GGGTATTGCA TCAGATACTA ACTTGGTTAA ACAAGAAAAA
GCTTACTTGG ATTCTTTGGC CACTAAGCCC AGTGCGGGCG ATGTAGAACT GTTTTAG
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| Protein sequence | MLKGLTSKAD ARLKPALPGF TNVYRYWDAR FAKVAVKLQP GECYVTKNDE MLVTVLGSCI
AACIRDPVAG VGGMNHFMLP EQAAGHEITR NSLSNPELCY GNWAMEHLIN SIIKCGGMRN
RLEIKLFGGG RVLANMVRMD IGQRNIEFVE SFLANDELPV IAKDLGGNYP RKILYFAATG
QAKMKKMGIA SDTNLVKQEK AYLDSLATKP SAGDVELF
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