| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3061 |
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| Symbol | |
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| ID | 3967666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3914031 |
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| End bp | 3916334 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922158 |
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| Product | xylanase/chitin deacetylase-like |
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| Protein accession | YP_528530 |
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| Protein GI | 90022703 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000494565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000302702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGTCAA TCAATGTATG CGGCAGACGC CTCAAGCAAG CCCTCGCAGC AATAGCAACC
GCTGCAGCAA CTCTCTGGTT TACGCCAGTG GATGCACAAA CCTTAACCTC AAACCAAACT
GGTACTCATG GTGGTTACTA CTATTCCTTC TGGACCGACA GTGCTGGCAC TGTTTCTATG
ACACTCGGCA ATGGCGGCAA TTACAGTTCA TCGTGGAGCA ATACCGGTAA CTGGGTGGGA
GGTAAAGGCT GGCAAACGGG GGGACGCAAA ACCGTAAACT ATTCCGGTAC GTTTAACCCC
TCGGGCAATG GTTATTTAAC CCTCTACGGT TGGACCCAAA ACCCACTCAT TGAATACTAC
ATCATTGAAA GCTGGGGCAC CTATCGCCCA GGTGAAAGCG GAACCTACTA CGGCACCGTC
AACACCGATG GCGGCACTTA CGATATTTAT CGCACCCAAC GCGTTAACCA ACCGTCAATT
GAAGGCACTG CAACGTTTTA TCAGTACTGG AGTGTTAGGC AACAAAAACG CGTAGGCGGC
ACCATAACAA CCGGCAACCA TTTTGATGCG TGGGCGAGTC ATGGCCTTAA CCTAGGCACA
CACAATTACA TGGTAATGGC CACCGAAGGT TATCAAAGTA GCGGCAACTC CAATATTACC
GTTAGCGAAG GCAGCGGTTC GAGCAGTACT AGTTCGAGTA GCTCTAGCAC CGGTGGCCCA
AGTGGTACCA ATATTGTTGT GCGCGCACAA GGTGTAAGCG GCCAAGAACA TATCAATTTA
ATTATTGGCG GTAACGTAGT GGCAGACTGG ACGCTTTCAA CCAGCATGCA AGATTACACC
TACACCGGTA ATGCCGCAGG CGACCTGCAA GTAGAATACG ACAACGATGC TAGTGGTCGC
GATGTAGAGC TAGACTATGT GTATGTGAAT GGCGAAATTC GTCAAGCAGA AGACATGGAA
TACAACACCG CAACTTACAG TGGTGAATGT GGTGGCGGTT CCTATTCGCA AACCATGCAC
TGCAGCGGTG TAATTGGCTT TGGCGATACC AGTGATTGTT TTAGCGGCAA CTGTAATGGT
GCATCTTCTA CAAGTTCTAG TTCGTCTAGT AGCTCAACCA GCTCTAGCAC AAGCTCTGGC
GGTAACAATA ACAGCGGCAT TACTGTTCGC GCACGCGGTA CCAATGGCGA TGAACATATC
AACCTTATTG TTGGCGGCAA TATAGTAGGC AATTGGACGC TCACCACCAG CAACCAAAAT
TATGTTTACA ACGGCAATGC ATCTGGTGAT GTAGAAGTAC AATTCGACAA CGATGCCAAC
GGTCGCGATG TTATTCTCGA TTACGTAATA GTAAATGGCG AAACTCGCCA AGCGGAAGAT
ATGGAATACA ACACGGCGAC CTACAGCGGT TCCTGTGGTG GTGGCTCCTA TTCGGAAACA
ATGCACTGCA GCGGCGAAAT TGGTTTTGGT CACACCGACG ATTGCTTTAG TGGAAATTGC
ACTAGCAGCA GCGGCACAAC CGGTAGCTCT GGAGGAACAT CAAGCAATAA CGGTACAAGT
AGCTGTAACG GTTATGTAGG TATTACCTTC GATGATGGCC CAGGCAATAA CACCGCTACA
TTAATAAACT TACTACAACA AAATAACTTA ACCCCAGTAA CTTGGTTTAA CACAGGCCAA
AATATTGCTG CCAATACAGG TCAGTTTGCC CAGCAAAAAA GTGTTGGTGA AATTCAAAAC
CACAGCTACA CCCATTCCCA TATGCTTAAT TGGAGCTATC AACAAGTTCG CGACGAACTC
GCCAGCACCA ATCAAGCTAT TGTGAATGCT GGGGGCGCAA CGCCAACTCT ATTCCGTCCG
CCTTATGGCG AAACAAACTC CACCATTAAT CAAGCGGCAC AAGATTTAGG CCTGCGCGTA
ATAACCTGGG ATGTAGATTC GCGCGATTGG GATGGCGCAA GCGCTTCAGC TATTGCCAAC
TCGGCTAATC AGTTGCAAAA CGGCCAAGTA ATTTTGATGC ACGATGCCAG CTACAACAAT
ACCAACGGAG CCATATCACA ATTTGCAGCC AATCTAAGAG CAAGAGGGCT ATGTGCAGGT
AAAATAGACC CAAGCACTGG CCGCGCAGTT GCACCAAGCA CAAATACCGG CGGCAACACT
GGCAGCAATA CAGGAAATGG CGGTAATGGC GGCATGTGTA ACTGGTACGG CACCAGCATT
CCATTATGCC AAACTACCAA CGACGGTTGG GGCTGGGAAA ACTCACAAAG CTGCGTTTCG
CAAAATACCT GTAACTCACA ATAA
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| Protein sequence | MKSINVCGRR LKQALAAIAT AAATLWFTPV DAQTLTSNQT GTHGGYYYSF WTDSAGTVSM
TLGNGGNYSS SWSNTGNWVG GKGWQTGGRK TVNYSGTFNP SGNGYLTLYG WTQNPLIEYY
IIESWGTYRP GESGTYYGTV NTDGGTYDIY RTQRVNQPSI EGTATFYQYW SVRQQKRVGG
TITTGNHFDA WASHGLNLGT HNYMVMATEG YQSSGNSNIT VSEGSGSSST SSSSSSTGGP
SGTNIVVRAQ GVSGQEHINL IIGGNVVADW TLSTSMQDYT YTGNAAGDLQ VEYDNDASGR
DVELDYVYVN GEIRQAEDME YNTATYSGEC GGGSYSQTMH CSGVIGFGDT SDCFSGNCNG
ASSTSSSSSS SSTSSSTSSG GNNNSGITVR ARGTNGDEHI NLIVGGNIVG NWTLTTSNQN
YVYNGNASGD VEVQFDNDAN GRDVILDYVI VNGETRQAED MEYNTATYSG SCGGGSYSET
MHCSGEIGFG HTDDCFSGNC TSSSGTTGSS GGTSSNNGTS SCNGYVGITF DDGPGNNTAT
LINLLQQNNL TPVTWFNTGQ NIAANTGQFA QQKSVGEIQN HSYTHSHMLN WSYQQVRDEL
ASTNQAIVNA GGATPTLFRP PYGETNSTIN QAAQDLGLRV ITWDVDSRDW DGASASAIAN
SANQLQNGQV ILMHDASYNN TNGAISQFAA NLRARGLCAG KIDPSTGRAV APSTNTGGNT
GSNTGNGGNG GMCNWYGTSI PLCQTTNDGW GWENSQSCVS QNTCNSQ
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