| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2967 |
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| Symbol | |
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| ID | 3967806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3769240 |
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| End bp | 3771513 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922064 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_528436 |
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| Protein GI | 90022609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.482503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.818361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGAA CAAAAGATAT GAAATTTCGT TTTCCCATTG TCGTCATCGA TGAAGATTTT
AGGGCCGAAA ATATCTCTGG CTCGAGTATT CGCGATCTAG CCGAAGCAAT TGGTAACGAA
GGGATGGAAG TTGTAGGCTT TACCAGCTAT GTAGACCTCA CCTCCTTTGC TCAGCAAGCA
AGCCGTGCAT CGTGTTTTAT TGTTTCTATC GACGACGATG AGTTCGGCTC GGGTTCACCC
GAAGAAGTGG CCGTACCTAT TGAGGCGTTG CGAAGCTTTA TATTAGCGGT TAGAAAGCGC
AATACCGATA TTCCTATCTT CCTATACGGT GAAACCCGCA CTGCGCAGCA TATCCCCAAT
GATGTATTGC GCGAGCTACA CGGCTTTATT CACATGTTTG AAGACACGCC CGAGTTTGTG
GCGCGCCATA TTATCCGTGA GGCGAAAAAG TATTTGTCGT CACTCGCGCC ACCATTTTTT
AATGCCCTTA TGGAGTACGC AAGCGATAGC TCATACTCGT GGCATTGCCC TGGGCACTCT
GGTGGCGTAG CGTTTTTAAA AAGCCCCATT GGCCAAATGT TCCACCAGTT TTTTGGCGAG
AACATGCTGC GCGCAGACGT GTGCAACTCG GTAGATGAGC TAGGTCAGCT GCTGGATCAC
ACCGGCCCAG TTGCCGCGAG CGAGCAAAAT GCCGCCCGTA TATTTAACAG TGACCATTTG
TTTTTTGTGA CTAACGGTAC TTCTACATCC AACAAAATCG TGTGGCACTC CACCGTAGCG
CCTGGCGACA TTGTGGTAGT AGATAGAAAC TGCCACAAAT CGATTTTGCA CTCCATTATT
ATGACCGGCG CCATCCCTGT GTTTTTAATG CCTACGCGCA ACCACTACGG CATTATTGGT
CCTATTCCAA AGTCTGAATT TACTATGGAA TCTATCCGCG AAAAGATAGA AGCCAACCCG
TTTGCGCGTA AAGCCAAAAA CAAAAAGCCC CGTATCCTCA CTATTACGCA AAGTACCTAC
GACGGTATTT TGTATAACGT GGAGCAAATC AAAGAGATTC TTGGCTCCAA TATCGACACA
TTGCATTTCG ACGAAGCTTG GTTGCCCCAT GCTACGTTCC ACGACTTTTA TAAAAACATG
CACGCCATAG GCACAGACCG GCCGCGTTCG GACGACACCT TAGTATTCGC CACACAATCT
ACCCATAAAC TGCTTGCTGG CTTATCGCAG GCGTCGCAAA TATTGGTGCA AAACGGCAAC
AACCGTAAAT TGGACACTCA CCGTTTTAAC GAATCCTACT TAATGCATTC TTCCACCAGC
CCGCAATATT CCATTATTGC CTCGTGCGAT GTGGCTGCAG CCATGATGGA GGCCCCCGGC
GGTACCGCGC TAGTAGAAGA ATCGCTGCTA GAAGCGCTCG ATTTCCGCCG TGCCATGCGC
AAAGTAGATG CAGAGTTTGG TGATGATGAC TGGTGGTTCC AAGTTTGGGG GCCTAAGGAT
ATTGCCGAAG AGGGCATTGG CGAGCGCGAA GATTGGGTTA TACGCGAAGA TGATGACTGG
CACGATTTCG GCAATATTGA ATCTGGCTTT AATATGCTCG ACCCCATCAA AGCCACTATC
ATCACCCCCG GGCTAAACTT GAAGGGCGAC TTCGATGAGT TTGGTATTCC GGCTGCAATT
GTAAGTAAAT ACTTGGCTGA GCACGGCATT ATCATCGAAA AAACCGGCCT GTATTCCTTC
TTCATTATGT TCACTATCGG CATTACCAAA GGCCGATGGA ATTCCATGGT GACGGAATTG
CAGCAATTTA AAGACGATTA CGACCAAAAC CTGCCTTTAT GGCGTGTTTT ACCGGAGTTC
GTGAGTAAAC ACAAACAGTA TGAGCGCATT GGTTTGCGCG ATTTGTGTAC CCAAATTCAC
GATATGTATA AAAAGTACGA CGTGGCTAAA ATTACCACTG ATATGTACCT ATCTAAAATA
GAGCCTGCTA TGACCCCAGC AGATGCTTGG GCAAAAATGG CTCACCGCGA AATAGAGCGC
GTATCTATTG ATGAAATAGA AGGCCGTATT ACTGCGATGT TAGTAACCCC TTACCCACCG
GGTATACCTT TGATGGTGCC GGGCGAGCGA TTCAACAGCA CTATTATTAG CTACTTGAAG
TTCGCGCGCG ATTTCAACTC TGCGTTACCG GGCTTTGAGA CAGACGTACA CGGTCTAGTG
AAAGACACCG TAAACGGGGT AGAAGGCTAC TATATCGATG TAGTTAAAGA GTAA
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| Protein sequence | MIGTKDMKFR FPIVVIDEDF RAENISGSSI RDLAEAIGNE GMEVVGFTSY VDLTSFAQQA
SRASCFIVSI DDDEFGSGSP EEVAVPIEAL RSFILAVRKR NTDIPIFLYG ETRTAQHIPN
DVLRELHGFI HMFEDTPEFV ARHIIREAKK YLSSLAPPFF NALMEYASDS SYSWHCPGHS
GGVAFLKSPI GQMFHQFFGE NMLRADVCNS VDELGQLLDH TGPVAASEQN AARIFNSDHL
FFVTNGTSTS NKIVWHSTVA PGDIVVVDRN CHKSILHSII MTGAIPVFLM PTRNHYGIIG
PIPKSEFTME SIREKIEANP FARKAKNKKP RILTITQSTY DGILYNVEQI KEILGSNIDT
LHFDEAWLPH ATFHDFYKNM HAIGTDRPRS DDTLVFATQS THKLLAGLSQ ASQILVQNGN
NRKLDTHRFN ESYLMHSSTS PQYSIIASCD VAAAMMEAPG GTALVEESLL EALDFRRAMR
KVDAEFGDDD WWFQVWGPKD IAEEGIGERE DWVIREDDDW HDFGNIESGF NMLDPIKATI
ITPGLNLKGD FDEFGIPAAI VSKYLAEHGI IIEKTGLYSF FIMFTIGITK GRWNSMVTEL
QQFKDDYDQN LPLWRVLPEF VSKHKQYERI GLRDLCTQIH DMYKKYDVAK ITTDMYLSKI
EPAMTPADAW AKMAHREIER VSIDEIEGRI TAMLVTPYPP GIPLMVPGER FNSTIISYLK
FARDFNSALP GFETDVHGLV KDTVNGVEGY YIDVVKE
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