Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2893 |
Symbol | |
ID | 3968061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3666100 |
End bp | 3667791 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921990 |
Product | hypothetical protein |
Protein accession | YP_528362 |
Protein GI | 90022535 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.724025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0200907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTTTA ATGGTAGCTT ATTTTTCACC TTGTCGTTTT TCTCTCACCA TCGACTTTCC CACTACATAC ACGCATTTCG TCGCGACCTT GTGGCCGTGA TTTGTGCGCT AGTTCTGGCC GGCGATGCAT TCGCGAGTAG TGCCCTTCAA GGTGCTGCTG TTAACGATAG TATCCGCCAG CGCTTAGAGG CTTGGAGTGC TGGATATCCT GCAAAAATTA GCAGCGCACC TATCCGCAAC AGTGCTTTGT TAAACGCCTA TTACGAAGAG ACAGGGTTTG CACCGCTATG GTTAAAAGAT TCTGGCCGTG CTTTTAATAG CGCAGCGTTA GACTTGATTG CCGTATTGCA AGGGGTCGAT AAAGAAGGCT TGCTACCTGC AGACTACCAT ATTGCCTACC TAGGCCAGCT TATTACTGAA CCGAGTGAAA TCTCGAGTGA TGCCGAGTTG GTATTAACGG ATGCATTTTT GTTTTTAGCG CAGCATATTC TGGCCGGTAA AGTTGACCCA GAAACGCTGA CGAATGAGTG GAAGCCAGCA AAGGAAGTGG TGGACGCGCG AGCACTATTA ACGAAAGTGG CTAGTAACGT ACCTATAGCC GACATTGTGC AATCTTTGCG GCCGCGGCAG CCCCGTTACG CTCGGCTAGT AAAAACGCTA GCTTGGTTGA ATAGCACCCA AGCTCCTGAC TGGGAGCCAT TAGCGCTTTC GCCTGCCATT AAAAAAGGTA TGGCCGATAC GCGTTTATCG CCCATTGCGG AACGACTTCG GTTTTGGGGT GATCTAAGTG AAAGTGAAGA GACGTTTACG CACTACGAAG GTGAGCTGAT GGAAGCAGTT ACCCGCTTTC AACGGCGCCA CGGGCTGGAG CCAGATGGTG TGGTGGGCAA GAATACGTTA CTTGCGTTGA ATGTATCACC CGTACAGCGC GCAAATGATG TTGTGGTGAA CCTCGAGCGT TGGCGGTGGC TTGATCAAAA TATGGGGGAC TATTTTATAG TAGTTAACAT AGCCAATTTT GATTTGCGGG TTTACAAAAG TAACGAGCTG GTAATGCAAA AGCCGGTTAT TGTTGGCAGA AACTACCGTA AAACGCCGGT GTTCAGCGAT AAAATTCGCT TTCTGGTTTT TAACCCTACA TGGACAGTGC CGCAAAAGCT CGCCGTGCAG GATAAGCTGC CAGAAATTAA GAAAGATATT AGCTACCTAG AAAAATACGG GTTTACCCTG TATGCGCTGG GTGAGAACAC AGTGGTAAAC CCAGCAGATG TCGAGTGGGA TAAACTGCAT AAAAGGTTCC CTTATCGAAT GGTGCAAGCG CCGGGGCCGT TGAATGCATT GGGGCAAGTG AAGTTTATGT TTCCTAACGC TTACGATGTT TACTTGCACG ATACACCGTC GCGGGAGCTG TTTTCAAAAA CTGAGCGGGC ATTTAGCTCG GGTTGTATTC GCGTTTCGGA CCCGATAGAG CTGGCGAGTA AATTGTTAGA GCCAAATGGA ATGGGCATAG ATCAAATTAA TGAGGTGTTA TCTTCCGCAA AAACAACAAC GGTTAATTTA AAAACACCCG TGCCAGTGCA TATAGAATAT TGGACTGCAT GGGTAGATAG TAGTGGCAAG TTACAGTTTA GAAACGATAT TTACGAACGC GATAAACCGT TGTTTAGTGC GTTAACGCTA CCTATAGAAT AA
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Protein sequence | MYFNGSLFFT LSFFSHHRLS HYIHAFRRDL VAVICALVLA GDAFASSALQ GAAVNDSIRQ RLEAWSAGYP AKISSAPIRN SALLNAYYEE TGFAPLWLKD SGRAFNSAAL DLIAVLQGVD KEGLLPADYH IAYLGQLITE PSEISSDAEL VLTDAFLFLA QHILAGKVDP ETLTNEWKPA KEVVDARALL TKVASNVPIA DIVQSLRPRQ PRYARLVKTL AWLNSTQAPD WEPLALSPAI KKGMADTRLS PIAERLRFWG DLSESEETFT HYEGELMEAV TRFQRRHGLE PDGVVGKNTL LALNVSPVQR ANDVVVNLER WRWLDQNMGD YFIVVNIANF DLRVYKSNEL VMQKPVIVGR NYRKTPVFSD KIRFLVFNPT WTVPQKLAVQ DKLPEIKKDI SYLEKYGFTL YALGENTVVN PADVEWDKLH KRFPYRMVQA PGPLNALGQV KFMFPNAYDV YLHDTPSREL FSKTERAFSS GCIRVSDPIE LASKLLEPNG MGIDQINEVL SSAKTTTVNL KTPVPVHIEY WTAWVDSSGK LQFRNDIYER DKPLFSALTL PIE
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