| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2841 |
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| Symbol | |
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| ID | 3968185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3588666 |
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| End bp | 3591599 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921938 |
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| Product | ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like |
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| Protein accession | YP_528310 |
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| Protein GI | 90022483 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00280772 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.38274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTA ATAATAATGC AAGCGTGCAC TCAGACATGT TGCCAAAGGG CACCATAATG
CGTGTGGCCA AAAAAGAGGT TGCGTTGTTT TTCGCCTCGC CCGTTGCCTA TTTGTTTTTG
GCAACATTTG CCGCAATTAC ATTGTTTATA TTCTTTTGGG GGGAGTCGTT TTTTGCGCGC
AATATTTCCG ATGTGCGCCC ACTGTTTGAA TGGATGCCGC TACTGTTAGT ATTTTTGTGT
GCAACCTTAA CAATGCGACT ATGGAGTGAC GAACGTCGCA GCGGTACCCT TGAATACATA
CTTACTCAAG CCGTGCCGTT ATGGCATTTT GTTGTAGGTA AATTTCTAGG CTGTATGTTT
TTACTTGCCG TTGCGTTAGT GTTGACATTA CCTCTGCCTA TTACCGTAGC GTACATAGGC
GATTTAGATT GGGGCCCTGT ATTCGCCGGT TACATAGCTG CTATTTTACT TGGTGCGGCT
TATTTAAGTA TCGGCTTGTT TGCCTCTGCC CGTACCGATA GCCAAATTGT GAGTTTAATA
AGTGCCTGTG CGCTTAGCGG TTTATTATAT TTGGTTGGCA CTAGCAGTAT TACCAGTTTT
GCCGGTAATC AGTTTGGCGA ATGGTTGCGC TTATTGGGTA CAGGCTCGCG CTTCGAGTCT
ATTACTCGCG GCGTAATTGA TATGCGAGAC TTGTATTACT ACATCAGTAT TGCTGCGGTA
TTTTTAGTTC TGAATACCTA CGTATTAGAG CGCGAACGCT GGGCTACCGA TGGGGTTAAA
CCGCGTCATA AGCAGTGGGT GGCCGCCACC GCATTGCTTG CTTTAAATGC GCTAGGGGCA
AATATTTGGT TGAATCAAAT AAATGTATTG CGCATGGATG TTACCCACGG CAACCAATAT
TCCATCTCTG AATCCACTAA GGGGTATTTA AATCAACTGC AAGAACCGCT CTTGGTTCGC
GGTTATTTCA GTGCAAAAAC TCACCCACTA CTTGCGCCGT TAGTGCCGCA AATGCGCGAC
TTAATAAAAG AATACCAAGT AGCGGGCAAT GGTAAAGTTC GCATTGAATT TGTAGACCCG
ATGGCCGAGC CAGAGTTAGA AAAAGAGGCT AATCAAAAAT TTGGCATTCA GCCAGTGCCA
TTCCAAGTGG CAGATAGATA CCAATCATCC ATTGTGAGTT CCTATTTTGA TGTGCTAGTA
CAGTACGGCG ACGAATATCA AGTACTCGGC TTTGGCGACC TTATAGAAGT ACAAGCGCGC
AGTGAATCTG ACATTAATGT GCAATTGCGT AACCCAGAGC ACGATTTAAC CCGCGCAATT
AAAAAGGTGC TACACAGCTA TCAAGCTGGC GGTAATTTAT TTGATACCGT AAAAAGCAAT
TTAATGTTTA ACGCTTACCT CTCTGCAGAC GAGAAACTAC CGTCTCAATT GGCGGAGTTT
AAACAGCAAG TAACCAGCGT ACTTGATAGC ACTAAAGCGC AGGCCGATGG GCGATTAAAA
GTGAATGTTA TCGACCCAGA TAGCAACGCC GAAATAGCCA AACGCATTGG TGATGATTAC
GGCTTTATGC CCATGGCTAC CAGCCTGTTT AGTAACGAGC GTTTTTATTT TTATATGACG
CTCAGCAACG GCGAACAGGT TGTGCAAATC CCCATTGATG ACATGACCCA GGCAAGCTTC
GAGCGAAACT TAGAGGCAGG CATAAAACGC TTCGCTACAG GTTTTACCAA AACGGTTGCG
CTGGTTACAC CTAGCAATGC CCCTGCATCA CCCTATATGG GTTACGGCCA AGGTGGCGCT
CGTTTCTCGC GCTTAGAAGC ATTTATAGGC AGCGAGTTGA ATGTTATTAG CGAAGACTTA
TCCGATGGCG CTGTTTCGGG TGAGGCGGAC ATTCTAGTGC TGGCCGCGCC AAAAGAGCTG
AATGAGAAAC AAGTGTTTGC GGTGGATCAG TTCTTGATGA AAGGCGGTAC GGTTATCGCT
GCAACCTCAC CGTTTTCGGC TAATTTATCT AACCGCAGTT TAGCTATGCA AAAGCATACC
AGCGGCTTAG AAGATTGGTT AGCGCACTAT GGTTTAAGCG TAGATGATGA GCTAGTACTC
GACCCGCAAA ATACGGCGTT CCCCGTGCCT GTTAGTCGCA ATGTGGGTGG CTTTCAGCTG
CAAGAAATTC GCATGTTGGA TTACCCCTAT TTTGTCGATG TGCGCGGCGA AGGGTTAAAT
GGCGATAATT TAATTAGCGC AGAGTTACCC CAACTAACAG TACCTTGGGC TTCCCCCATT
GTGGTAAACC AAGAAAAGCA AAACGAACGC ACGATAACCG AATTGCTGCG CAGTTCAAAC
AAGTCGTGGG TATCTCAATC GCTTAGTGTT GTGCCGCAGG TTAGCGCCAA TGGCGTAAGT
GGATTTACAC CCAGTACCCA GCGCGATAGC TTCGCCTTGG GCGTGCTAAG CGAAGGGCGT
TTCGACTCCT ACTTCGCGGG TAAAAACTCG CCATTGTTAG AGAGCAAGCC AGAAGCTGAA
ACCGAAAACG CGTCACAAGA AGATACTGCT AGCGAAGCAG AAGAGGCGTT TCAATTTAGC
GGCGTTATTG AACGCTCGCC TGAAACTGCA CGAATTATTC TTGTAAGTTC TAACGACTTT
CTACGCGATG AGGTTTTACA GTTAGTAAGC AATGCACAGC GTACCGAGTA CCTCAACCCG
TTACAGTTTG CAGCAAATGC TGTGGAGTGG TCTTTAGAAG ACGCAGGCTT ATTAAGTATT
CGCTCGCGCG GCCACTTTAA CCGCACTCTC CCTGCAATGG AGCAAAGCAC ACAGATGTTT
TGGGAGTACT TTAACTATGG CCTGGCCGCT TTCGCGTTAG CGCTACTCGC CTTTGGCGCT
CGCCGAGCAC GCCAAGTAAA ACAACGTCAA TATGTAAAGC TTTTAGCTAA CTAA
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| Protein sequence | MQPNNNASVH SDMLPKGTIM RVAKKEVALF FASPVAYLFL ATFAAITLFI FFWGESFFAR
NISDVRPLFE WMPLLLVFLC ATLTMRLWSD ERRSGTLEYI LTQAVPLWHF VVGKFLGCMF
LLAVALVLTL PLPITVAYIG DLDWGPVFAG YIAAILLGAA YLSIGLFASA RTDSQIVSLI
SACALSGLLY LVGTSSITSF AGNQFGEWLR LLGTGSRFES ITRGVIDMRD LYYYISIAAV
FLVLNTYVLE RERWATDGVK PRHKQWVAAT ALLALNALGA NIWLNQINVL RMDVTHGNQY
SISESTKGYL NQLQEPLLVR GYFSAKTHPL LAPLVPQMRD LIKEYQVAGN GKVRIEFVDP
MAEPELEKEA NQKFGIQPVP FQVADRYQSS IVSSYFDVLV QYGDEYQVLG FGDLIEVQAR
SESDINVQLR NPEHDLTRAI KKVLHSYQAG GNLFDTVKSN LMFNAYLSAD EKLPSQLAEF
KQQVTSVLDS TKAQADGRLK VNVIDPDSNA EIAKRIGDDY GFMPMATSLF SNERFYFYMT
LSNGEQVVQI PIDDMTQASF ERNLEAGIKR FATGFTKTVA LVTPSNAPAS PYMGYGQGGA
RFSRLEAFIG SELNVISEDL SDGAVSGEAD ILVLAAPKEL NEKQVFAVDQ FLMKGGTVIA
ATSPFSANLS NRSLAMQKHT SGLEDWLAHY GLSVDDELVL DPQNTAFPVP VSRNVGGFQL
QEIRMLDYPY FVDVRGEGLN GDNLISAELP QLTVPWASPI VVNQEKQNER TITELLRSSN
KSWVSQSLSV VPQVSANGVS GFTPSTQRDS FALGVLSEGR FDSYFAGKNS PLLESKPEAE
TENASQEDTA SEAEEAFQFS GVIERSPETA RIILVSSNDF LRDEVLQLVS NAQRTEYLNP
LQFAANAVEW SLEDAGLLSI RSRGHFNRTL PAMEQSTQMF WEYFNYGLAA FALALLAFGA
RRARQVKQRQ YVKLLAN
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