| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2812 |
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| Symbol | |
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| ID | 3968215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3549153 |
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| End bp | 3549833 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921909 |
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| Product | putative hydroxylase |
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| Protein accession | YP_528281 |
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| Protein GI | 90022454 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3128] Uncharacterized iron-regulated protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.192542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000224129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGCTATTAA AAATTCCTAA CGTACTTAGT AAAGAGCAAG TTGAAACTGC AAAAAGCAAA
CTGCTAGATG CAGATTGGGC CGACGGCAAT ATAACGGCAG GTTACCAGTC TGCCAAAGCA
AAAAACAACC TGCAATTGCC TGAAAACTCA CCTATAGCCA TTGAGCTGGG TGATATTGTT
CTTACCGCGC TAGCGCAAAA TAATATGTTT ATGTCCGCCG CGCTACCGCT AAAAATATTC
CCGCCATTAT TTAATTGCTA CCAAGGTGGT CGCAGTTTTG GTGTGCATGT AGATAACGCA
ATTCGCCAAG TGCCCGGCAC GCCAGTAAAA GTGCGTACAG ATATTTCTAT GACACTATTT
CTATCGGAGC CAGATGAGTA CGAGGGTGGC GAGTTAGTTA TAGAAGATAC TTACGGTTCG
CAAAGCGTTA AATTAGCCGC TGGCGATATG GTGCTTTACC CTGCTACTAG CTTACACAGC
GTAACCCCGG TAACCAAAGG CCGACGTTTG GCTTCATTTT TTTGGTTGCA AAGCATGGTA
AATAGCGACG AAAAACGCAC GCTACTTTTC GATATGGATA TGGCAATTCA ATCTTTGCGC
GCTCAAGTCG ACGATAGCCC AGAAATAGTT CAGCTAACTG GCGTGTACCA TAATTTGCTT
CGTCAATGGG CGCAGACCTA A
|
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| Protein sequence | MLLKIPNVLS KEQVETAKSK LLDADWADGN ITAGYQSAKA KNNLQLPENS PIAIELGDIV
LTALAQNNMF MSAALPLKIF PPLFNCYQGG RSFGVHVDNA IRQVPGTPVK VRTDISMTLF
LSEPDEYEGG ELVIEDTYGS QSVKLAAGDM VLYPATSLHS VTPVTKGRRL ASFFWLQSMV
NSDEKRTLLF DMDMAIQSLR AQVDDSPEIV QLTGVYHNLL RQWAQT
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