Gene Sde_2810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2810 
Symbol 
ID3968213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3546753 
End bp3547319 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content47% 
IMG OID637921907 
Productalkyl hydroperoxide reductase, C subunit 
Protein accessionYP_528279 
Protein GI90022452 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID[TIGR03137] peroxiredoxin 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.62826e-07 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAAACTA TTATCAACAC TAAAATTCTT CCATTTAAAG CCACCGCTTT TTCTAAAGGC 
GACTTTATTC CTGTAAGTGA ACAAGACCTA CTAGGTAAGT GGTCGGTAGT GATGTTCTAC
CCTGCGGACT TTACCTTTGT ATGCCCAACA GAGCTTGGCG ACATGGCAGA TCACTATGCG
CAATTACAAG AGATGGGCGT TGAGGTTTAC TCCGTATCTA CCGACACGCA CTTTACACAC
AAAGCTTGGC ACGACAGCTC GGACACCATA GGCAAAATTA ACTTTCCAAT GATTGGCGAC
CCAACCGGCA CCATTTCGCG CAACTTTGGG GTAATGATTG AAGAAGACGG CCTAGCACTG
CGCGGTACAT TCGTCATTAA CCCAGAAGGC GAAATTAAAG TAGCGGAAAT TCACGACCTA
GGTATTGGCC GCTCTGCGAA AGAATTGGTT CGTAAAATTC AAGCAGCACA ATACGTAGCT
GAGCACGACG GCGAAGTTTG CCCTGCCGCT TGGCAACCAG GTGAAGCAAC ACTTGCTCCT
TCTTTAGACC TTGTAGGCAA AATCTAA
 
Protein sequence
MQTIINTKIL PFKATAFSKG DFIPVSEQDL LGKWSVVMFY PADFTFVCPT ELGDMADHYA 
QLQEMGVEVY SVSTDTHFTH KAWHDSSDTI GKINFPMIGD PTGTISRNFG VMIEEDGLAL
RGTFVINPEG EIKVAEIHDL GIGRSAKELV RKIQAAQYVA EHDGEVCPAA WQPGEATLAP
SLDLVGKI