| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2796 |
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| Symbol | |
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| ID | 3968275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3527748 |
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| End bp | 3528329 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637921893 |
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| Product | transcription factor jumonji, jmjC |
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| Protein accession | YP_528265 |
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| Protein GI | 90022438 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000132584 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000604093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCGCT CCATTGCGAT ACGGTGTTTT GCGTTCATAG CGAATCTGCC CGCTAGCCAT
CAACGCCAGA CACTTCTCGG GAAGCGCAGG GCGGCTCACG TAGCAGCAAA GCCGCGCAAG
TTTGTCCCGC TGAAGAGCTT TCGCAACTAC GCCAGCATGC TGGAAAAAAC CGATGTAGCT
GGCCACGCGG CGGTTGGTCA TTGCCTGATC TCCTCGCCCA AGCAAGATTT GCAGGGCAAA
GACCTTACGA CGACGCTGAG CCTCAGTGGC GATGCGGCAG GCGACGTACA AGCTTGCCAT
TACGTAAGTA CTGTTTGTCG CTCGGACAAC CATCAAGTCA GTAAACTTCG CGCTGCACTG
GGCGAGCAAG CCAAGGTCGA CAAGTTCCAA GACCAAGAGG CCCCAATTGT GTTCTTGAGC
ATGTGTGCCA GCGACACCAG TGAATCACCC CGAGGACTGA ACTTCCTCTT CGATAAGCAC
CGCATTAACG TAGCTATATC GAGAGCACAA TCACTGGCAG TAGTCGTCGG CAATCCTAAT
ATCGACAAAA CACCGGTGAG CCGGGTTGAC CAGCTCAAGT AG
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| Protein sequence | MSRSIAIRCF AFIANLPASH QRQTLLGKRR AAHVAAKPRK FVPLKSFRNY ASMLEKTDVA
GHAAVGHCLI SSPKQDLQGK DLTTTLSLSG DAAGDVQACH YVSTVCRSDN HQVSKLRAAL
GEQAKVDKFQ DQEAPIVFLS MCASDTSESP RGLNFLFDKH RINVAISRAQ SLAVVVGNPN
IDKTPVSRVD QLK
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