| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2740 |
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| Symbol | |
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| ID | 3968373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3468755 |
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| End bp | 3470128 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921840 |
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| Product | sodium-dependent transporter family protein |
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| Protein accession | YP_528212 |
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| Protein GI | 90022385 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00332714 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGC AAGGTATACA TGGGGTGTGG GCTAACCGAT GGACGTTTGT GTTGGCGGCC
ACTGGGTCTG CGGTTGGTTT GGGGAATATA TGGAAGTTCC CTTACATTAC CGGCGAAAAC
GGTGGCGGGG CATTTGTACT TGTATACCTA CTGTGTATAG CGCTAATTGG TATTCCTATT
ATGGTGGCCG AAGTGTTGCT GGGTCGCCGC GGTCGCCAAA GTCCTATTAA CTCCATGCGT
TATGTGGCCA AAGAAGCGGG TTTAAGTTCC AACTGGTCTG CAGTGGGTTG GATGGGAGTG
CTGGCAGGCT TATTTATTCT TTCTTTTTAT AGTGTGGTTG CTGGCTGGGC GCTGCATTAT
GTGTTTCAAA CCGGCACGGG GGCGTTTGAG GGGGCAACGC GTGAAGTGTC TCAGGGCGTG
TTCGGTGAAT TACTTTCTAA TAACACCGCA TTAATTAGCT GGCATACGGT GTTTATTTTG
ATGACCGTCG GCGTGGTAAT GGCCGGGGTA ACGCGCGGAC TGGCTATGGT TGCGCGGGTA
TTAATGCCCT TGTTGTTTGT GATGTTAATT ATGTTGTTGG GCTATGGCAT GGCCGCGGGC
GACTATGTTG GCGCTGCAAA GTTTATGTTT AGCTTTAAGG TGTCTGCGCT ATCGTGGGAT
GGAGTGCTTA TTGCTATGGG CCATGCGTTT TTTACGCTTA GCTTGGGCAT GGGCTCTATT
ATGGCGTACG GTGCTTATAT GCCTAGCCAT TCAAACATTG GCCAAACGGT AGTCACCGTG
GGCGTGTTGG ATACGCTGGT GGCTTTGGTT GCAGGTATGT GTATTTTCCC TATTGTTTTT
GCAAGTGGTA TAGAGCCATC AAGTGGGCCG GGCTTGCTGT TTCAAAGTTT ACCGGTCGCC
TTTGGCAATA TGCCGGGCGG GCTGTTTTTT GGTACCTTGT TTTTTATTCT GGTTTCTATT
GCAGCTTGGA GCTCGGCTGT TTCACTTATT GAGCCTGGGG TGGCATGGTT AATTGAAACC
GGTAAATTCA ACAGGGTTAC CGCTAACTTG GTGTTGGGCG GGGCCAGCTG GCTAGTTGGT
ATAAGCTGCG CGCTTTCTTA TAACTTACTT GCCGACTTCA AACCTTTATT CTTAGCAAAT
CGCACACCGT TCGACTTTTT AGATTTTCTT ACGGCCCAAG TAATGCTTCC TTTAGGTGGT
TTATTTATAG CGATTTTTGT AGGTTGGCGA ATGGCTAAAG CGGTTATGGA AGATGAAATG
GATGCAGAAG GGCACCCAAT GCTGGATATT TGGTTGTTTG TATTGCGTTA TATATCGCCC
GTATTGGTGG TAATAGTGTT TGTAATGACA TTGATGAATA CATTTGCGGG TTAA
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| Protein sequence | MAQQGIHGVW ANRWTFVLAA TGSAVGLGNI WKFPYITGEN GGGAFVLVYL LCIALIGIPI
MVAEVLLGRR GRQSPINSMR YVAKEAGLSS NWSAVGWMGV LAGLFILSFY SVVAGWALHY
VFQTGTGAFE GATREVSQGV FGELLSNNTA LISWHTVFIL MTVGVVMAGV TRGLAMVARV
LMPLLFVMLI MLLGYGMAAG DYVGAAKFMF SFKVSALSWD GVLIAMGHAF FTLSLGMGSI
MAYGAYMPSH SNIGQTVVTV GVLDTLVALV AGMCIFPIVF ASGIEPSSGP GLLFQSLPVA
FGNMPGGLFF GTLFFILVSI AAWSSAVSLI EPGVAWLIET GKFNRVTANL VLGGASWLVG
ISCALSYNLL ADFKPLFLAN RTPFDFLDFL TAQVMLPLGG LFIAIFVGWR MAKAVMEDEM
DAEGHPMLDI WLFVLRYISP VLVVIVFVMT LMNTFAG
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