| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2729 |
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| Symbol | |
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| ID | 3968418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3457693 |
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| End bp | 3458856 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921829 |
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| Product | carbamoyl-phosphate synthase small subunit |
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| Protein accession | YP_528201 |
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| Protein GI | 90022374 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.422158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGAGTG GGCATTTGTT AAACGTGGCA TTACGGCCTG CCATTCTGGT TTTGGCGGAC
GGTAGTGTTT TTCGTGGTAC AGCGATAGGC GCTGATGGCG ATTCTGTTGG TGAAGTGGTG
TTTAACACTG CAATGACGGG TTACCAGGAA ATTCTCACCG ATCCTTCCTA TGCGAAGCAA
ATCGTGACTC TTACATACCC TCATATCGGT AACACGGGCA CAACTTCCGA AGACGACGAG
TGCAGTAATG TCTGGGCGTC TGGTTTAGTT ATTCGTGATA TGACAATGGT ATCGAGTAAT
TTCCGCAGCG AGCAAACCCT AGAAGACTTT TTGAAGTCTA AAAATATCGT AGGTATAGCC
GACATAGACA CACGCCGTTT AACGCGAATT CTTCGCGATA AAGGTGCTCA AAGCGGTTGT
ATTATGGCTG GCGAAGTGGA CGAAGACATT GCACTTGCTA AAGCTAAAGC GTTTGCCGGT
TTGCAGGGCA TGGATTTAGC AAAAGTTGTG TCTACCGAAA AGGCTTACCC TTGGACTGCC
GGCTCTTGGC AGCTAGGCAA AGGCTTTGGC GGTTTGCCAG AAGGCGATCG CTTTAAAGTA
GTGGCATACG ATTTTGGTGC TAAAGCCAAT ATTCTGCGTA TGTTGGTAGA TCGCGGTTGT
GAGCTTACCG TTGTGCCTGC GCAAACACCG GCTGCCGATG TACTAGCCAT GAACCCTGAT
GGTGTGTTCC TTTCTAATGG CCCAGGCGAC CCCGAGCCAT GCGACTACGC TATTGAAGCA
ATTAAAACGC TGCTAGATAA AAATATTCCT CTATTTGGTA TTTGCCTTGG CCACCAGTTG
TTGGCGTTGG CGAGTGGCGC AAAAACAGTA AAAATGAAAT TTGGCCACCA CGGCGCGAAC
CACCCTGTGC AAGATTTAAA AACGGGCAAG GTAATGATCA CCAGTCAGAA CCACGGTTTT
GCTGCGGATG AAGCATCGTT GCCTAGCAAT ATAGTTGCTA CCCATAAGTC ATTGTTTGAT
GGCTCGCTGC AGGGTATTGA ACGCACAGAC AAGCGCGCAT TCAGCTTCCA AGGGCACCCA
GAAGCAAGCC CTGGCCCGCA TGATGCTGCC GAACTGTTTG ACCATTTTAT TGATTTGATG
AATGAAGCAA AAAGCGAGAT GTAA
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| Protein sequence | MTSGHLLNVA LRPAILVLAD GSVFRGTAIG ADGDSVGEVV FNTAMTGYQE ILTDPSYAKQ
IVTLTYPHIG NTGTTSEDDE CSNVWASGLV IRDMTMVSSN FRSEQTLEDF LKSKNIVGIA
DIDTRRLTRI LRDKGAQSGC IMAGEVDEDI ALAKAKAFAG LQGMDLAKVV STEKAYPWTA
GSWQLGKGFG GLPEGDRFKV VAYDFGAKAN ILRMLVDRGC ELTVVPAQTP AADVLAMNPD
GVFLSNGPGD PEPCDYAIEA IKTLLDKNIP LFGICLGHQL LALASGAKTV KMKFGHHGAN
HPVQDLKTGK VMITSQNHGF AADEASLPSN IVATHKSLFD GSLQGIERTD KRAFSFQGHP
EASPGPHDAA ELFDHFIDLM NEAKSEM
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