| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2697 |
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| Symbol | |
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| ID | 3968477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3423713 |
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| End bp | 3424252 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637921795 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_528169 |
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| Protein GI | 90022342 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0247123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00024653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGAACAAT ATCGCGGCAC CACCATACTG TCTGTGCGCC GAGGCAATAA AGTTGTCATT
GGTGGAGACG GCCAAGTTTC TCTTGGCAAC ACTATTATGA AAGGCAACGC TTGCAAGGTG
CGTCGCCTGT ATAAAAACCA AGTTATTGCA GGTTTTGCTG GCGGCACCGC TGACGCATTC
ACCCTGTTTG AACGCTTTGA AGCTAAGCTA GAAGCACACG ACGGCCAACT TGTACGCGCA
GCTGTTGAAC TAGCCAAAGA TTGGCGAACA GACCGCGCCC TGCGCCGCTT AGAAGCTTTG
CTTGCCGTAG CAAACAAAGA TGCCTCACTG ATAGTAACCG GTAATGGCGA TGTTATTCAG
CCAGAAAACG ACCTTATTGC CATCGGCTCT GGCGGCGCCT TTGCCCAATC GGCAGCGCGC
GCACTACTAG AAAATACCGA GTTAGAAGCC AGAGATATTG TCGAGAAAAG CCTCGGCATA
GCCGGCGATG TGTGTGTTTA CACCAACCAC CACTTCACCA TTGAAGAGCT GAGTTTCTAA
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| Protein sequence | MEQYRGTTIL SVRRGNKVVI GGDGQVSLGN TIMKGNACKV RRLYKNQVIA GFAGGTADAF
TLFERFEAKL EAHDGQLVRA AVELAKDWRT DRALRRLEAL LAVANKDASL IVTGNGDVIQ
PENDLIAIGS GGAFAQSAAR ALLENTELEA RDIVEKSLGI AGDVCVYTNH HFTIEELSF
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