Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2671 |
Symbol | |
ID | 3968490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3387773 |
End bp | 3388246 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921769 |
Product | RNA binding S1 |
Protein accession | YP_528143 |
Protein GI | 90022316 |
COG category | [R] General function prediction only |
COG ID | [COG0802] Predicted ATPase or kinase |
TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.543969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGCAGG CGTTAGTCGA AAAAGAAATT TACCTGGTAA ACGAAGAGGC AACCGTAGCG CTAGGTGCTG CGCTGGGGAA GATGATTCCC GCAGGAGCAG TCATATTTTT AGATGGCACC CTTGGCGCGG GCAAAACCAC TTTTTGCCGC GGAGTGCTGC ATAGTTTTGA TTATTCAGGT CCGGTTAAAA GCCCTACCTA TACATTGGTC GAGCCATATG AATTAGCCCA GCGCACCATT TACCATTTCG ATTTGTACCG GCTTGGCGAC CCTGAAGAGC TAGAATATAT GGGGATTCGC GATTACTTTA GTGCAGAAGC AATTTGTTTA ATCGAATGGT TTGAAAAGGG CGAAGGTGTT TTGCCTCAAG CGGATATTCT GGTTAAGGTA GTGCCCAGTG GGGAGGGCCG TAGCGCTACA CTTTGTGGGC TAACAACAAA TGGCATGAAT TGGGTGGATA ACATAAATGA ATAA
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Protein sequence | MVQALVEKEI YLVNEEATVA LGAALGKMIP AGAVIFLDGT LGAGKTTFCR GVLHSFDYSG PVKSPTYTLV EPYELAQRTI YHFDLYRLGD PEELEYMGIR DYFSAEAICL IEWFEKGEGV LPQADILVKV VPSGEGRSAT LCGLTTNGMN WVDNINE
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