Gene Sde_2671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2671 
Symbol 
ID3968490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3387773 
End bp3388246 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content47% 
IMG OID637921769 
ProductRNA binding S1 
Protein accessionYP_528143 
Protein GI90022316 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.543969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCAGG CGTTAGTCGA AAAAGAAATT TACCTGGTAA ACGAAGAGGC AACCGTAGCG 
CTAGGTGCTG CGCTGGGGAA GATGATTCCC GCAGGAGCAG TCATATTTTT AGATGGCACC
CTTGGCGCGG GCAAAACCAC TTTTTGCCGC GGAGTGCTGC ATAGTTTTGA TTATTCAGGT
CCGGTTAAAA GCCCTACCTA TACATTGGTC GAGCCATATG AATTAGCCCA GCGCACCATT
TACCATTTCG ATTTGTACCG GCTTGGCGAC CCTGAAGAGC TAGAATATAT GGGGATTCGC
GATTACTTTA GTGCAGAAGC AATTTGTTTA ATCGAATGGT TTGAAAAGGG CGAAGGTGTT
TTGCCTCAAG CGGATATTCT GGTTAAGGTA GTGCCCAGTG GGGAGGGCCG TAGCGCTACA
CTTTGTGGGC TAACAACAAA TGGCATGAAT TGGGTGGATA ACATAAATGA ATAA
 
Protein sequence
MVQALVEKEI YLVNEEATVA LGAALGKMIP AGAVIFLDGT LGAGKTTFCR GVLHSFDYSG 
PVKSPTYTLV EPYELAQRTI YHFDLYRLGD PEELEYMGIR DYFSAEAICL IEWFEKGEGV
LPQADILVKV VPSGEGRSAT LCGLTTNGMN WVDNINE