| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2601 |
|---|
| Symbol | |
|---|
| ID | 3968594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 3298671 |
|---|
| End bp | 3299447 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637921699 |
|---|
| Product | methionine aminopeptidase, type I |
|---|
| Protein accession | YP_528073 |
|---|
| Protein GI | 90022246 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGG CCGTATCGAT TAAAACCCCA GAAGAAATAG AAAAAATGCG CATTGCAGGC
CGAATGGCCG CAGAAGTGCT CGAAATGATT GGCGAGCACG TGCAACCCGG TGTAACCACC
GCAGAACTAG ACAAAATTTG CCACGATTAC ATCACACAAG TTCAAAAAGC TATACCGGCA
CCACTTAATT ACAAAGGGTT TCCCAAATCC ATTTGTACCT CGGTAAACCA AGTGGTGTGC
CACGGCATAC CCTCCGAGAA AAAAGTGCTG AAGTCTGGCG ACACCATCAA CATTGATGTA
ACCGTCATAT TCGACGGCTA CCACGGCGAC ACCAGTAAAA TGTTTTTTGT GGGCACCGTG
GCACCCCACG CCCACCGCTT GGTTAAAGTC ACTCAGGAAT GCCTATATAA AGGTATCGAG
TTGGTAAAAC CCGGCTGCCG CTTGGGCGAC ATTGGCCACG TGATACAAAC TCATGCGCAA
AAAAATCACT ACACCGTTGT ACGCGAATAC TGTGGCCACG GCATAGGTGC GGTATTCCAC
GAAGACCCGC AGGTATTGCA CTACGGCACC CCCGGCACAG GCATGACCTT AAAAGAAGGC
ATGACCTTCA CTATCGAGCC AATGATTAAT GCCGGCAAAC CGCACACCAA ACTTAAAAAA
GACGGCTGGA CAGTAGAAAC CCGAGACGGC CGCCTATCTG CGCAATGGGA GCACACGCTC
GCAGTGACCG CAACGGGCGT AGAAGTACTT ACTGCTCGCA AAGAGGAATC ATTCTAA
|
|---|
| Protein sequence | MTMAVSIKTP EEIEKMRIAG RMAAEVLEMI GEHVQPGVTT AELDKICHDY ITQVQKAIPA
PLNYKGFPKS ICTSVNQVVC HGIPSEKKVL KSGDTINIDV TVIFDGYHGD TSKMFFVGTV
APHAHRLVKV TQECLYKGIE LVKPGCRLGD IGHVIQTHAQ KNHYTVVREY CGHGIGAVFH
EDPQVLHYGT PGTGMTLKEG MTFTIEPMIN AGKPHTKLKK DGWTVETRDG RLSAQWEHTL
AVTATGVEVL TARKEESF
|
|---|
| |