| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2595 |
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| Symbol | pyrH |
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| ID | 3968645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3290072 |
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| End bp | 3290815 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921693 |
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| Product | uridylate kinase |
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| Protein accession | YP_528067 |
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| Protein GI | 90022240 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0528] Uridylate kinase |
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| TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0151239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAACA CCCCCGATCG AAAGTATAAA CGTATTCTCC TCAAGCTCAG TGGCGAGCAG
TTAATGGGCG ATGAAGGGTT CGGTATAGAC CCTAAAGTAT TAGATAAAAT GGCCCTAGAA
ATTGGGCAGT TAGTAGGGAT TGGGGTTCAG GTAGGCTTGG TTATAGGTGG TGGTAACCTG
TTTAGAGGTG CTGCGCTAAG TCGAGCAGGG CTAGATCGCG TGACCGGTGA CCATATGGGT
ATGCTGGCTA CGGTAATGAA TGCGCTGGCA ATGCGCGATG CGCTTGAGCG CTCTAACATT
TCTTCTACGG TAATGTCTGC TATTCCGATG CACGGCGTTA CCGATCAGTA CGACCGCCGC
AAGGCGCTTC GCCTGCTAGA CAACGGCGAA GTTGTTATTT TTTCTGCCGG TACCGGCAAT
CCATTCTTTA CTACCGATTC TGCCGCGTGC CTGCGTGGCA TAGAAGTGAA TGCGGAATTG
GTTTTGAAGG CGACCAAAGT AGACGGCGTT TATTCCGCCG ACCCTATGAA AGATCCCACC
GCCGTTCGTT ACTCAAAACT CACCTACGAG AAAGTGCTAA CCGAACAGTT GGGCGTAATG
GACTTGACGG CAATTTGTTT GTGTCAAGAT CACAATATGC CAGTGCGTGT ATTCCAAATG
GATAAACAGG GTGCGCTTCT AAACATCGTT GTTGGCGGTG ATGAAGGCAC TTTGATTCAG
GGTAAAGAAA CTGAAGAGGC TTAA
|
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| Protein sequence | MPNTPDRKYK RILLKLSGEQ LMGDEGFGID PKVLDKMALE IGQLVGIGVQ VGLVIGGGNL
FRGAALSRAG LDRVTGDHMG MLATVMNALA MRDALERSNI SSTVMSAIPM HGVTDQYDRR
KALRLLDNGE VVIFSAGTGN PFFTTDSAAC LRGIEVNAEL VLKATKVDGV YSADPMKDPT
AVRYSKLTYE KVLTEQLGVM DLTAICLCQD HNMPVRVFQM DKQGALLNIV VGGDEGTLIQ
GKETEEA
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