| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2594 |
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| Symbol | frr |
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| ID | 3968644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3289509 |
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| End bp | 3290072 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921692 |
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| Product | ribosome recycling factor |
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| Protein accession | YP_528066 |
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| Protein GI | 90022239 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0233] Ribosome recycling factor |
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| TIGRFAM ID | [TIGR00496] ribosome recycling factor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00709219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATGA TAGATGATAT TAAAAGTGAT TCAGAAGAAC GTATGTCTCG TGCCATTGAG
GCGCTAGGCA CTCACTTTAA CAAAATTCGT ACTGGCCGTG CGCACCCAAG CATTTTAGAT
GGGGTGATGG TGTCCTACTA CGGAAGCGCC ACGCCTTTAA GCCAGGTTGC TAACGTGACG
GTATTGGATG CGCGTACTTT GTCTATTAGC CCTTGGGAAA AAAACATAGT GCCTGAAATT
GAAAAGGCAA TTATGAAGTC TGACCTAGGC TTAAACCCAG TAACCACAGG CGATTTGATA
CGTGTGCCAA TGCCTATGCT TACTGAAGAA ACGCGCAAAG GCTACATCAA GCGTGCTCGT
GCAGAAGCAG AATCTGCCCG TGTTTCTATT CGAAATGTTC GTCGCGATGC CTTGGCAGAA
GTGAAGGCGC TAGTGAAAGA CAAAGAAATT AGCGAAGACG ACGAGCGCAG AGCAGCGGAC
GAGATTCAAC AAATTACTAA TAAGTACGTA GCTGAAGTAG ATAAAGCGCT TAGCGCCAAA
GAAAAGGATC TAATGGAGAT TTGA
|
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| Protein sequence | MTMIDDIKSD SEERMSRAIE ALGTHFNKIR TGRAHPSILD GVMVSYYGSA TPLSQVANVT
VLDARTLSIS PWEKNIVPEI EKAIMKSDLG LNPVTTGDLI RVPMPMLTEE TRKGYIKRAR
AEAESARVSI RNVRRDALAE VKALVKDKEI SEDDERRAAD EIQQITNKYV AEVDKALSAK
EKDLMEI
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