| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2589 |
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| Symbol | |
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| ID | 3968639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3282556 |
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| End bp | 3285246 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921687 |
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| Product | dihydrodipicolinate synthase subfamily protein |
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| Protein accession | YP_528061 |
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| Protein GI | 90022234 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0085313 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA TTCTTGTAGT TTTGACATTG TTAACTTTGT CAGTGTCGTC TTATGCGGTG
AATTTCACCG TTACCGATAT CCGATTAGAG GGGTTACAGC GCGTATCCGC TAGCCCCGTG
TTTGCCGCTA TGCCTGTTAG GGTGGGCGAT AGCATCGATT CCGAAGATGT GCGCGAAGTT
ATCCGCTCTA TATTTGCTAC GGGCTATTTT ACCAACGTGC AAGTAGCACG CGACGGCAAC
GACCTTGTTG TTATTTTGCA AGAACGCCCA GCGATTAAGT CGATAGAGTT CGACGGTAAC
AAAGCAATTA AAACCGAGCA GCTCGAAGAG GTAATGACCG AAAACGGTAT TGCCGAAGGC
GAAATTTTGC AGCGCCACAT GTTGCAGCAA ATTACTCGCG AGCTAGAGCG TCAATACATT
GGTCAATCGC GTTACAGTGC CAATGTAGAA GCAGTAGTTG AAGATTTAGC CAACAATATG
GTGGCCATTA AAGTTGAAGT CGATGAGGGC AAAGCGGCCA GCATTCTTCA CTTTAATATC
GTTGGTAACG AAATATTTAG TGATGAGGAG CTTTTTAATG CTTTCGAGTT GCGTGAAAGT
GTTTGGTGGA AGTTCTTCTC TAAGGCCGAT CAATATTCGC GCGAAAAGCT AAGCGGCGAC
ATTGAGAAAT TAGAATCCTT TTACTTAGAT CGCGGTTACT TAGATTTTAA AGTGCTGTCG
AGCCAAGTGT CTGTAAGCCC AGATAAAGAG TCAGTGTATA TCACCCTAAA TATTAAAGAG
GGTGGTGTAT ATACCGTTAA AGATCTCGAT ATTGCTGGTG ACCCAATATT GCCAGAAGAG
CGTGTGCGCC GATTAATCTT GTTGCGCAAA GGTGAAACCT TCTCGCAAAT TTTAATGACG
GATACCGCAG AGTACATAAA AACCCTACTT GGTAACGCCG GTTATACCAA CGCTACAGTA
GAAGGTATTC CAGAAAAGAA CCCAGAAGAT AATACCGTTG TTGTTAACTT CTTGATCGAC
CCCGGCAAGC GCGTGTATGT GCGTCGTGTA GAGTTCCGCG GTAACACCAA ATCGAGCGAC
GAAGTGTTGC GCCGCGAAAT GCGTCAACAC GAAGGTGCAT CGGCTTCTAA CGCGCGCATT
GAACAGTCAA AAGTTCGTTT AGAGCGTTTG GGCTTCTTTA AAGAAGTAAC CGTAGAAAAC
AAAGATGTGC CAGGCACCGA CGATTTAATC GATGTTGAGT TTACTGTGGA GGAGCAACCT
TCAGGTCAAA TTCAAGCGAG TATCGGCTAT GCGCAGTACA CCGGTTTAAA CCTTGCGTTA
AATATTCAAG AAAACAACTG GTTGGGTACA GGTAAACAAG TTAACTTTGG TATTAATAAA
AACACTTACC AAACGATCTA TAACTTTGGT TATAACGACC CGTACTTTAC CCCAGACGGT
GTGAGCCGTG GTTTCTCGGC ATTCTATCGC ACGCGAGATT ACAGCCGCTT ACGGGTTGCA
GAATACGCCA CGGATTCGTT CGGCGGTAAT TTAAACTTTG GTTATCCTAT TTCTGAAATT
GAGCGTATTG GCTTTGGCGT GGGTATCGAT CACCAGTCGG TTACTGCGGG TAGTCGTGCA
GCAGCAGAGA TTCTAACCAG CCCTGTGCTG CGCTCTGGTA GTGATGCCTC GTATATTACA
CAAACCGATT ACAGCCAATA TATTGCTTCA GGTTTATTGG ATGAAAACGG TATACCTGTT
GAATATTTGC TAGATAGCAG GCCTGTAGAG CAAGATATGC TACTCGATGT AGACGAGGGC
TTTATCAATA AATACGGCGA TCAATTCTTG AGTGGTACGG TTAATTTTAA CTGGACTCGT
ATGACCCTTA ACCGCGGTGT GCTTGCAACA CGTGGTAGTT CGCAGCGCTT CTCGGTAGAG
GCAACCATTC CTGGTAGCGA CCTGCAATAC TATAAGTTTA ACTACGAGGC TCAAGCGTTT
GTACCTCTGT CACGCTTCTT TACTTTGCGC TTTAAGACCA CCTTGGGTTA CGGGGATGGT
TATGGCAAGA TGGAGCATCT CCCGTTTTTC GAGAACTTCT ACGCGGGTGG TTTTGGTTCA
GTACGCGGTT TCGAACGCTC CACACTTGGT CCTAAAGGTA CACCGCCAAG AGGCTACTCC
ACCACGCACA GTGGTTGGAT CGATTTAAAT CGTAATGGCC AAAAGGATGA CCCCACTTAT
GTAGATACCA ACGGCAACGG TATTTACGAC GAAGATGAAT TCTTTAATGA ATACGTGGGC
TATAACAGCA CCTATATTTT GTGTGACAAT GCCACCTACT GTGAGCCAGG CAAATTAATG
TACAGCTCCA CTTCTGGCGG GTTTATTAAC ACCAGAGAAA ACGCAATTGG TGGTAATGTA
CTTACCGAGT TTACAACTGA GTTATTGTTG CCAATCCCAT TTATTGAAGA TACTCGCTCT
ATGCAGTTAG TAGCGTTTGT TGACGCAGGT AACGTATTTT CAACGGATTG TGGATCTGAG
CAAATTGGTT GTAGCAACGT CGATTTTGAA AAACTGAGCT CGTCAGCTGG TATTGGCTTT
ACGTGGATAT CGGGTTTTGG GCCAATGACA TTCAGCGTGG CTAAGGCGCT GCATGAAAAT
GAATTCGATT CGAGAGAAGT GTTTCAGTTC TCTTTTGGTA GCGGGTTTTA A
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| Protein sequence | MKQILVVLTL LTLSVSSYAV NFTVTDIRLE GLQRVSASPV FAAMPVRVGD SIDSEDVREV
IRSIFATGYF TNVQVARDGN DLVVILQERP AIKSIEFDGN KAIKTEQLEE VMTENGIAEG
EILQRHMLQQ ITRELERQYI GQSRYSANVE AVVEDLANNM VAIKVEVDEG KAASILHFNI
VGNEIFSDEE LFNAFELRES VWWKFFSKAD QYSREKLSGD IEKLESFYLD RGYLDFKVLS
SQVSVSPDKE SVYITLNIKE GGVYTVKDLD IAGDPILPEE RVRRLILLRK GETFSQILMT
DTAEYIKTLL GNAGYTNATV EGIPEKNPED NTVVVNFLID PGKRVYVRRV EFRGNTKSSD
EVLRREMRQH EGASASNARI EQSKVRLERL GFFKEVTVEN KDVPGTDDLI DVEFTVEEQP
SGQIQASIGY AQYTGLNLAL NIQENNWLGT GKQVNFGINK NTYQTIYNFG YNDPYFTPDG
VSRGFSAFYR TRDYSRLRVA EYATDSFGGN LNFGYPISEI ERIGFGVGID HQSVTAGSRA
AAEILTSPVL RSGSDASYIT QTDYSQYIAS GLLDENGIPV EYLLDSRPVE QDMLLDVDEG
FINKYGDQFL SGTVNFNWTR MTLNRGVLAT RGSSQRFSVE ATIPGSDLQY YKFNYEAQAF
VPLSRFFTLR FKTTLGYGDG YGKMEHLPFF ENFYAGGFGS VRGFERSTLG PKGTPPRGYS
TTHSGWIDLN RNGQKDDPTY VDTNGNGIYD EDEFFNEYVG YNSTYILCDN ATYCEPGKLM
YSSTSGGFIN TRENAIGGNV LTEFTTELLL PIPFIEDTRS MQLVAFVDAG NVFSTDCGSE
QIGCSNVDFE KLSSSAGIGF TWISGFGPMT FSVAKALHEN EFDSREVFQF SFGSGF
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