Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2583 |
Symbol | rnhB |
ID | 3968633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3277856 |
End bp | 3278455 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921681 |
Product | ribonuclease HII |
Protein accession | YP_528055 |
Protein GI | 90022228 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.584045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGAAT ATTGTATGGC GCGTCAGTTT GTTGCTGGCG TCGATGAAGT AGGGCGCGGC CCCTTGGCTG GGGATGTAGT TGCCGCTGCG GTTATTTTAG GGGAAGACCA CGGCATAGAG GGCTTGGCCG ATTCAAAAAA AATAACCGAG AAAAAACGCG ATGCGTTATT TGATGTTATT CAAGAGCGGG CGGTAAGTTT TTGTATTGCC CGCGCGAGTG TCGAGGAAAT TGACGAGCTG AATATTTTGC ATGCGAGTTT GCTTGCCATG AAGCGCGCTG TTGAGGGATT AAACATTCAA CCGCAGTATA TTTATGTGGA TGGCAATAAA TTGCCAAAGT GGACATATTC CGCCGAAGCC GTCGTAAAAG GGGATAGTCT CGTAGAGGAA ATTAGCGCTG CATCTATTTT AGCGAAAGTA ACGCGAGATA GAGAAATGGT GGCACTTGAC GAAAAATACC CAGGTTACGG GCTGGCGGGG CATAAAGGCT ACCCCACTAA AGTACATATG GATGCACTTA AACGCCTAGG GCCAACAATC ATTCATCGCA AATCTTTCGC ACCGGTTCGT GCGGCCATCG AGCAGATGAA TCTTTTTTAA
|
Protein sequence | MFEYCMARQF VAGVDEVGRG PLAGDVVAAA VILGEDHGIE GLADSKKITE KKRDALFDVI QERAVSFCIA RASVEEIDEL NILHASLLAM KRAVEGLNIQ PQYIYVDGNK LPKWTYSAEA VVKGDSLVEE ISAASILAKV TRDREMVALD EKYPGYGLAG HKGYPTKVHM DALKRLGPTI IHRKSFAPVR AAIEQMNLF
|
| |