Gene Sde_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2583 
SymbolrnhB 
ID3968633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3277856 
End bp3278455 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content47% 
IMG OID637921681 
Productribonuclease HII 
Protein accessionYP_528055 
Protein GI90022228 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.584045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAT ATTGTATGGC GCGTCAGTTT GTTGCTGGCG TCGATGAAGT AGGGCGCGGC 
CCCTTGGCTG GGGATGTAGT TGCCGCTGCG GTTATTTTAG GGGAAGACCA CGGCATAGAG
GGCTTGGCCG ATTCAAAAAA AATAACCGAG AAAAAACGCG ATGCGTTATT TGATGTTATT
CAAGAGCGGG CGGTAAGTTT TTGTATTGCC CGCGCGAGTG TCGAGGAAAT TGACGAGCTG
AATATTTTGC ATGCGAGTTT GCTTGCCATG AAGCGCGCTG TTGAGGGATT AAACATTCAA
CCGCAGTATA TTTATGTGGA TGGCAATAAA TTGCCAAAGT GGACATATTC CGCCGAAGCC
GTCGTAAAAG GGGATAGTCT CGTAGAGGAA ATTAGCGCTG CATCTATTTT AGCGAAAGTA
ACGCGAGATA GAGAAATGGT GGCACTTGAC GAAAAATACC CAGGTTACGG GCTGGCGGGG
CATAAAGGCT ACCCCACTAA AGTACATATG GATGCACTTA AACGCCTAGG GCCAACAATC
ATTCATCGCA AATCTTTCGC ACCGGTTCGT GCGGCCATCG AGCAGATGAA TCTTTTTTAA
 
Protein sequence
MFEYCMARQF VAGVDEVGRG PLAGDVVAAA VILGEDHGIE GLADSKKITE KKRDALFDVI 
QERAVSFCIA RASVEEIDEL NILHASLLAM KRAVEGLNIQ PQYIYVDGNK LPKWTYSAEA
VVKGDSLVEE ISAASILAKV TRDREMVALD EKYPGYGLAG HKGYPTKVHM DALKRLGPTI
IHRKSFAPVR AAIEQMNLF