Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2580 |
Symbol | |
ID | 3968689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3275986 |
End bp | 3276309 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921678 |
Product | translation initiation factor 1 (eIF-1/SUI1) |
Protein accession | YP_528052 |
Protein GI | 90022225 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCTA ACAGCAAACT CGTCTATTCC ACCGACAGCG GCAGAATAAA AGAGGATAAG CCACAGCAAG CAGCGCCGAC AGGGGACGGC ATTGTAAGAA TTAAACGCGA AACCAAAGGC CGCAAGGGCA AGGGCGTAAC CCTTGTAGAA GGCTTAATGC TGCCAGAAGC CGAGCTGAAA GCCCTCTCTA AAAAACTTAA ACAGCTATGT GGCACAGGCG GCACACTAAA AAACTTTACT GTGGAAATCC AGGGTGACCA CCGCGAAAAA CTACAGACCT ATTTAAAAGA GCAAGGCTTT ACAGTGAAAT TAGCAGGAGG CTAA
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Protein sequence | MASNSKLVYS TDSGRIKEDK PQQAAPTGDG IVRIKRETKG RKGKGVTLVE GLMLPEAELK ALSKKLKQLC GTGGTLKNFT VEIQGDHREK LQTYLKEQGF TVKLAGG
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