Gene Sde_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2580 
Symbol 
ID3968689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3275986 
End bp3276309 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content48% 
IMG OID637921678 
Producttranslation initiation factor 1 (eIF-1/SUI1) 
Protein accessionYP_528052 
Protein GI90022225 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTA ACAGCAAACT CGTCTATTCC ACCGACAGCG GCAGAATAAA AGAGGATAAG 
CCACAGCAAG CAGCGCCGAC AGGGGACGGC ATTGTAAGAA TTAAACGCGA AACCAAAGGC
CGCAAGGGCA AGGGCGTAAC CCTTGTAGAA GGCTTAATGC TGCCAGAAGC CGAGCTGAAA
GCCCTCTCTA AAAAACTTAA ACAGCTATGT GGCACAGGCG GCACACTAAA AAACTTTACT
GTGGAAATCC AGGGTGACCA CCGCGAAAAA CTACAGACCT ATTTAAAAGA GCAAGGCTTT
ACAGTGAAAT TAGCAGGAGG CTAA
 
Protein sequence
MASNSKLVYS TDSGRIKEDK PQQAAPTGDG IVRIKRETKG RKGKGVTLVE GLMLPEAELK 
ALSKKLKQLC GTGGTLKNFT VEIQGDHREK LQTYLKEQGF TVKLAGG