Gene Sde_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2578 
Symbol 
ID3968687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3274104 
End bp3274973 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID637921676 
Productmetallophosphoesterase 
Protein accessionYP_528050 
Protein GI90022223 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTAG ACACCTACGC GACGCAGAAG ACGGCCAAGG AACTTAGCTT GAAATACCGC 
ACTTTATTTA TCTCCGATGT ACATTTAGGC ACCAAAGACT GCAAAGCTGA CGCACTTAAC
GACTTTTTAA AGCACTACTC CTGTGATCAG CTGTACTTAG TGGGGGATAT TTTTGACGGC
TGGAAAATGC GCTCTGGCGT CTTTTGGCAC AAACACTTCA ATAAAGTGAT TCGCCGTATT
TTAAAACTCG CCAAAAATGG AACCCCTATC TACTACATTA CGGGCAACCA TGACGAATTC
TTGCGCAAGT ACGCCAACAT GCAATTCGAC AACATACAAC TGCATAATCG GTTTACCCAC
GTAACCGCGC AAAATAAGCG CTTTCTAATT ATTCATGGCG ACCAATTTGA AAGCGTAACC
CGCTGCAGCA AAGCGTTAAA ATATATAGGC GACAAGGGCT ACGACATACT GATGCAAATT
AACCGTCTAT CCAACCGCAT ACGCGCGCGC TACGGTTATG GGTATTGGTC ATTCGCGGCC
TTTTTAAAAA CGCATATAAA ACGCGCCAAA GAATACATAC ACGACTACGA AGTCGCAGTA
GCCCATGGCG CCAAACGACA GGGGTTTGAT GGTGTAGTGT GTGGCCACAT ACACCAAGCT
GCGAACAAAA CAATTGAAGG TATTAGCTAT TTAAATACCG GAGACTGGGT GGAATCGTGT
ACCGCCATTG CTGAAGATTA TGACGGTAAT TTTCACCTAA TAGACTGGTT AAACCACCCT
AAAAACATCG AGAAGCAAGC GCGGCGTCAA TCCAAACTAT ACGGCACTCG CCCGCGTCAA
AAAGAGCTGT CCCTTACTGA GGCAGACTAA
 
Protein sequence
MYLDTYATQK TAKELSLKYR TLFISDVHLG TKDCKADALN DFLKHYSCDQ LYLVGDIFDG 
WKMRSGVFWH KHFNKVIRRI LKLAKNGTPI YYITGNHDEF LRKYANMQFD NIQLHNRFTH
VTAQNKRFLI IHGDQFESVT RCSKALKYIG DKGYDILMQI NRLSNRIRAR YGYGYWSFAA
FLKTHIKRAK EYIHDYEVAV AHGAKRQGFD GVVCGHIHQA ANKTIEGISY LNTGDWVESC
TAIAEDYDGN FHLIDWLNHP KNIEKQARRQ SKLYGTRPRQ KELSLTEAD