Gene Sde_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2576 
Symbol 
ID3968685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3270047 
End bp3271558 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content49% 
IMG OID637921674 
Productmolybdopterin converting factor, subunit 1 
Protein accessionYP_528048 
Protein GI90022221 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTAGCC GTTTAGTTCT AAATCACACT CATCAACGCA AGCAACTATT TAAGGGCTTA 
GGTATTAAAT GCTTAGGTGC TTTTATTAAA TGCTCGGGCA CCTTCGCTGT AACGCTTGCG
CTTGCCCTAC CCAGCCAGGC TGCTGACCTG CCTCTTCCCG ACTTAGGCTC AGCCGGCTCG
GGCGTGATTA CTCCTGCTCA AGAATATGAG CTTGGCCAAA AATGGCTGCG TATTTATCGC
GCGCAGGTGC CCACTACCAA CGACCCGTTT GTGCTCTCGT ACACAGAAAA GCTCATTTAT
GGGATCTCCC GCTACAGCGA TCTCACCGAC TCGAGATTAA GCATTTTAGT GGTAGAGAAC
CCCTCCTTAA ACGCATTTGC TGTACCCGGT GGCGTGGTGG GTATTCATAC CGGCCTTTTT
AATTACGCCG AAAACGAACA GCAGTTCTCT TCGGTAATTG CCCACGAATT GGCGCACCTT
AGCCAGCGTC ACTATGCCCG TAAGGTAGAA GAGCAACAGC AAAACACTAT GATTACTCTC
GCTGCGCTAT TGGCCAGTGT CATTGTGGCC GCCACCACTG ATGGCGACGC AGGTATCGCT
GCAATTTCGG CCACTCAAGC CGCTGCGATA GATGCCCAAC TGCGTTTTAG CCGCGGCATG
GAACAAGAAG CAGATCGCAT TGGCATGGAA ACCCTAGTAC GCGCAGGTAT GGACCCCTAC
GCAATGCCGG CCATGTTTGA GCAAATTTTA AAATCTACCC GCTATTCACG CAGGCCCCCA
GAATTTTTAC TTACCCACCC TGTTACCGAA TCGCGTATTT CGGATTCGCG CAACCGCGCG
CAGCAGTACC CGAAAAAGTT TTACGAAAAA AGCACCGAGT ACGAGCTTGT TAAAATTCGC
GTTAGCCTAA ACAACACCAA TAATTATGGG GAAGATGTTC GCCGCTTTGA AAATGAATTG
CGAGGTAACC GTTTCAGCAA ACTGGCCGCA CAGTATGGCT TGGTGTTATC GCTTACCCGT
GCGGGTAAAA CCGAGCGCGC GCTTACTTTA GCAGAAGAGT TGGTGGCCGC AGAGCCAGAG
AACATTTATT TCACCGTCGC GCGTGCAGAT GTATATGCCG AAAAAGGCGA TTTCGAAACA
GCAGTAAAAG CGCTGCAAGA AAAACTAAAA ACCCACCCTA ATCACCATGC ACTTAACGTG
CGCCTAGCCG AAGTGCTAAT GAAAGCCGGA CGCTACAACG AGTGCGCAGA GCTGCTGAAT
CGCCATGTGC AACGCCGCCC CAATGACGAC TATGTGTGGT ATTTACTCGC AGAGGTACAA
GGTTTAACAG GTAACATTTT ACAAGTGCAC TTAGCTCGCG CAGAGTACTT TGCTTTAAAC
GGCATTTTTT CTAAGTCGGA AATACAGCTG CGTCACGCGC TTAAACGCGT GAAGGATGAT
GAGCATCAAA AAGCTAAAAT TGAAGAGCGC TTAAAAGAAG TAAGGCAGTT AGAAAGGGAG
ACTCTTCTTT AA
 
Protein sequence
MFSRLVLNHT HQRKQLFKGL GIKCLGAFIK CSGTFAVTLA LALPSQAADL PLPDLGSAGS 
GVITPAQEYE LGQKWLRIYR AQVPTTNDPF VLSYTEKLIY GISRYSDLTD SRLSILVVEN
PSLNAFAVPG GVVGIHTGLF NYAENEQQFS SVIAHELAHL SQRHYARKVE EQQQNTMITL
AALLASVIVA ATTDGDAGIA AISATQAAAI DAQLRFSRGM EQEADRIGME TLVRAGMDPY
AMPAMFEQIL KSTRYSRRPP EFLLTHPVTE SRISDSRNRA QQYPKKFYEK STEYELVKIR
VSLNNTNNYG EDVRRFENEL RGNRFSKLAA QYGLVLSLTR AGKTERALTL AEELVAAEPE
NIYFTVARAD VYAEKGDFET AVKALQEKLK THPNHHALNV RLAEVLMKAG RYNECAELLN
RHVQRRPNDD YVWYLLAEVQ GLTGNILQVH LARAEYFALN GIFSKSEIQL RHALKRVKDD
EHQKAKIEER LKEVRQLERE TLL