| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2570 |
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| Symbol | |
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| ID | 3968679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3261092 |
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| End bp | 3261784 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921668 |
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| Product | OmpA family protein |
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| Protein accession | YP_528042 |
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| Protein GI | 90022215 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA AACAACTTAT CTCTGCTGCA ACCTTCTCTG CCCTACTTAT TGTAAGCAAC
AGCGCATTTG CCGGCGAAAC CAAAACTCAA AAGCAGCGCG ACAACGACAA AGCTGCAGCC
ACATTAAGCA CCATGGTAAT TGGTGGCCTA GTTGGCGGCC CAGTTGGAGC ATTTATAGGT
GCGGTAACAG GCTCGCTTGC AGCTGAGCAC GCAGATACTA AACACCAACA ACAGGAACTC
ACCATAGCCA TGAACGAGGT AGAAGAAATG AAAGCACAAC TAGAAAAAGA TCAACAACGC
GCTAGCGCCA TGGAACAGAA AGCTGCCGAA AAATTAGAGT TTCAAGTGCT ATTCACCACC
GGCAGCGACG AGCTTTCGCA AACCGATTTA AAGCGGGTAA ATAGTGTTGC ACGCTACTTA
AACACCAACC CAGAGCTTAA AGTGAATTTA GAGGGGCACG CCGATCCACG CGGCACAGAC
GAATACAACT ATGTGCTTTC GGAAGAACGC GTTAAATCTG TGATTAAAGC GTTGGAAGAA
AAAGGGATTG ACCGCTCTCG AGTTACCTAC TCTGCTTACG GCTCAGACCT TTCAACGGCT
TATCAAGGTG ACTTAGAAGC TTACGCCTTA GATAGACGAG TAAAAATAGA TGTGGTTATG
AAAACAGACA ATAGCGTGGC AAGCAGTCAC TAA
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| Protein sequence | MKTKQLISAA TFSALLIVSN SAFAGETKTQ KQRDNDKAAA TLSTMVIGGL VGGPVGAFIG
AVTGSLAAEH ADTKHQQQEL TIAMNEVEEM KAQLEKDQQR ASAMEQKAAE KLEFQVLFTT
GSDELSQTDL KRVNSVARYL NTNPELKVNL EGHADPRGTD EYNYVLSEER VKSVIKALEE
KGIDRSRVTY SAYGSDLSTA YQGDLEAYAL DRRVKIDVVM KTDNSVASSH
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